RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 KHSRPQ92945 711 aaKnown RBP eCLIP14.69□□□□□ -0.06
RFPL3-201ENST00000249007 NEUROD6Q96NK8 337 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 COPRSQ9NQ92 184 aa14.69□□□□□ -0.06
RFPL3-201ENST00000249007 MOXD2PA6NHM9 499 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 FCER1AP12319 257 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 AKR1A1P14550 325 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 PPP4CP60510 307 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 CCDC184Q52MB2 194 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 TATDN1Q6P1N9 297 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 MB21D1Q8N884 522 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 PPP1R12CQ9BZL4 782 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 TANGO6Q9C0B7 1094 aa14.68□□□□□ -0.06
RFPL3-201ENST00000249007 LRRC37A2A6NM11 1700 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 TAL1P17542 331 aaPredicted RBP14.67□□□□□ -0.06
RFPL3-201ENST00000249007 TFCP2Q12800 502 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 ABCB5Q2M3G0 1257 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 GLT1D1Q96MS3 346 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 TINF2Q9BSI4 451 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 IL23AQ9NPF7 189 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 COG5Q9UP83 839 aa14.67□□□□□ -0.06
RFPL3-201ENST00000249007 SYNRGQ9UMZ2 1314 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 ZDBF2Q9HCK1 2354 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 A0A0G2JMZ2 1700 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 ZNFX1Q9P2E3 1918 aaKnown RBP14.66□□□□□ -0.06
RFPL3-201ENST00000249007 SMIM22K7EJ46 135 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 GTPBP6O43824 516 aaPredicted RBP14.66□□□□□ -0.06
RFPL3-201ENST00000249007 TLL1O43897 1013 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 ARID4AP29374 1257 aaPredicted RBP14.66□□□□□ -0.06
RFPL3-201ENST00000249007 MCAMP43121 646 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 KCNA10Q16322 511 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 CERKLQ49MI3 558 aaPredicted RBP14.66□□□□□ -0.06
RFPL3-201ENST00000249007 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 CABP5Q9NP86 173 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 SERPINB13Q9UIV8 391 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 ELP1O95163 1332 aa14.66□□□□□ -0.06
RFPL3-201ENST00000249007 FGBP02675 491 aa14.65□□□□□ -0.06
RFPL3-201ENST00000249007 ZNF865P0CJ78 1059 aaPredicted RBP14.65□□□□□ -0.06
RFPL3-201ENST00000249007 RABGGTBP53611 331 aa14.65□□□□□ -0.06
RFPL3-201ENST00000249007 CDCA7LQ96GN5 454 aa14.65□□□□□ -0.06
RFPL3-201ENST00000249007 CNPY2Q9Y2B0 182 aa14.65□□□□□ -0.06
RFPL3-201ENST00000249007 MTCH2Q9Y6C9 303 aa14.65□□□□□ -0.06
RFPL3-201ENST00000249007 PI4K2BG5E9Z4 385 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 PGK2P07205 417 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 CYP2C18P33260 490 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 CDK7P50613 346 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 CCSAPQ6IQ19 270 aaPredicted RBP14.64□□□□□ -0.07
RFPL3-201ENST00000249007 OTOP2Q7RTS6 562 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 KLHDC9Q8NEP7 349 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 CFAP54Q96N23 3096 aa14.64□□□□□ -0.07
RFPL3-201ENST00000249007 PRR33A8MZF0 331 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 MYOGP15173 224 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 POU3F3P20264 500 aaPredicted RBP14.63□□□□□ -0.07
RFPL3-201ENST00000249007 VTI1AQ96AJ9 217 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 MMP19Q99542 508 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 EHD4Q9H223 541 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 PCDHA11Q9Y5I1 949 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.63□□□□□ -0.07
RFPL3-201ENST00000249007 MYH1P12882 1939 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 TLR3O15455 904 aaKnown RBP14.63□□□□□ -0.07
RFPL3-201ENST00000249007 FLOT1O75955 427 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 UQCRFS1P1P0C7P4 283 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 FAM126BQ8IXS8 530 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 HLA-CQ95604 372 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 ATG4CQ96DT6 458 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 HDAC5Q9UQL6 1122 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 DIS3Q9Y2L1 958 aaKnown RBP14.63□□□□□ -0.07
RFPL3-201ENST00000249007 SLC4A7Q9Y6M7 1214 aa14.63□□□□□ -0.07
RFPL3-201ENST00000249007 A0A0U1RQG5 324 aaPredicted RBP14.62□□□□□ -0.07
RFPL3-201ENST00000249007 MYADML2A6NDP7 307 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 ARVCFO00192 962 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 RFXAPO00287 272 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 SLC25A27O95847 323 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 DSG3P32926 999 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 KCTD2Q14681 263 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 SEPT2Q15019 361 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 ZNF792Q3KQV3 632 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 PCSK9Q8NBP7 692 aaKnown RBP14.62□□□□□ -0.07
RFPL3-201ENST00000249007 SNRKQ9NRH2 765 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 FAM184BQ9ULE4 1060 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 USP34Q70CQ2 3546 aa14.62□□□□□ -0.07
RFPL3-201ENST00000249007 A0A1W2PRG0 241 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 ASGR1P07306 291 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 C6orf222P0C671 652 aaPredicted RBP14.61□□□□□ -0.07
RFPL3-201ENST00000249007 CST5P28325 142 aaPredicted RBP14.61□□□□□ -0.07
RFPL3-201ENST00000249007 GUCY1A2P33402 732 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 USP5P45974 858 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 DYNLL1P63167 89 aaKnown RBP14.61□□□□□ -0.07
RFPL3-201ENST00000249007 NHLH1Q02575 133 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 SAMD1Q6SPF0 538 aaPredicted RBP14.61□□□□□ -0.07
RFPL3-201ENST00000249007 SSH1Q8WYL5 1049 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 UIMC1Q96RL1 719 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 HIPK3Q9H422 1215 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 CD320Q9NPF0 282 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 TRIOO75962 3097 aa14.61□□□□□ -0.07
RFPL3-201ENST00000249007 DUSP11O75319 330 aaKnown RBP14.6□□□□□ -0.07
RFPL3-201ENST00000249007 ATP2A2P16615 1042 aaKnown RBP14.6□□□□□ -0.07
RFPL3-201ENST00000249007 SHMT1P34896 483 aa14.6□□□□□ -0.07
RFPL3-201ENST00000249007 TMEM132BQ14DG7 1078 aa14.6□□□□□ -0.07
RFPL3-201ENST00000249007 KRT40Q6A162 431 aa14.6□□□□□ -0.07
RFPL3-201ENST00000249007 TTC6Q86TZ1 520 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms