RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 MKRN1Q9UHC7 482 aaKnown RBP24.52■■□□□ 1.52
SH2D3A-201ENST00000245908 SBF2Q86WG5 1849 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 TM4SF1P30408 202 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 CASQ1P31415 396 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 GNG11P61952 73 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 FILIP1LQ4L180 1135 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 DGKHQ86XP1 1220 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 ANKS1AQ92625 1134 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 WDR24Q96S15 920 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 USP17L8P0C7I0 530 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 C12orf60Q5U649 245 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 TPTE2Q6XPS3 522 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 PPFIBP1Q86W92 1011 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 BLIDQ8IZY5 108 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 UBXN4Q92575 508 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 STAMQ92783 540 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 CTNND2Q9UQB3 1225 aa24.51■■□□□ 1.51
SH2D3A-201ENST00000245908 ROBO3Q96MS0 1386 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 EFCAB8A8MWE9 144 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 LONP1P36776 959 aaKnown RBP24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 RBL2Q08999 1139 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 FAM98CQ17RN3 349 aaKnown RBP24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 FAM177A1Q8N128 213 aaPredicted RBP24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 C4orf32Q8N8J7 132 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 MTRQ99707 1265 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 CARD6Q9BX69 1037 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 MAP3K9P80192 1104 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 TFAP4Q01664 338 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 KIFC2Q96AC6 838 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 BLZF1Q9H2G9 400 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 IL17RBQ9NRM6 502 aa24.5■■□□□ 1.51
SH2D3A-201ENST00000245908 ITIH6Q6UXX5 1313 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 TNRC6CQ9HCJ0 1690 aaKnown RBP24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 ZPR1O75312 459 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 PNMA1Q8ND90 353 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 DESI2Q9BSY9 194 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 RWDD2AQ9UIY3 292 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 PCDHA4Q9UN74 947 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 CCDC175P0C221 793 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 CLCN6P51797 869 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 GRM4Q14833 912 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 LIMA1Q9UHB6 759 aaKnown RBP24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 JAG2Q9Y219 1238 aa24.49■■□□□ 1.51
SH2D3A-201ENST00000245908 FAM205AQ6ZU69 1335 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 SOWAHDA6NJG2 315 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 MFAP3LO75121 409 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 MTF1Q14872 753 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 RRAGBQ5VZM2 374 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 CCDC24Q8N4L8 307 aa24.48■■□□□ 1.51
SH2D3A-201ENST00000245908 CCDC66A2RUB6 948 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 MRPL44Q9H9J2 332 aaKnown RBP24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 MRFAP1Q9Y605 127 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 BTAF1O14981 1849 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 NAV1Q8NEY1 1877 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 LRRC10BA6NIK2 292 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 TPM1P09493 284 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 FECHP22830 423 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 USP5P45974 858 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 TERF2Q15554 542 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 CCDC178Q5BJE1 867 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 ZNF658Q5TYW1 1059 aaPredicted RBP24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 PTF1AQ7RTS3 328 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 GPKOWQ92917 476 aaPredicted RBP eCLIP24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 RMND1Q9NWS8 449 aa24.47■■□□□ 1.51
SH2D3A-201ENST00000245908 M0R2N6 131 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 GNPATO15228 680 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 GNAQP50148 359 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 RAD9BQ6WBX8 426 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 STAG2Q8N3U4 1231 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 WDR66Q8TBY9 1149 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 CCDC51Q96ER9 411 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 ADGRG1Q9Y653 693 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 TXLNAP40222 546 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 FAM193AP78312 1265 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 SPAG1Q07617 926 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 PAK1Q13153 545 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 BMS1Q14692 1282 aaKnown RBP24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 KRT31Q15323 416 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 SLC4A8Q2Y0W8 1093 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 CNGA4Q8IV77 575 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 TCP11L1Q9NUJ3 509 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 MAD2L2Q9UI95 211 aa24.46■■□□□ 1.51
SH2D3A-201ENST00000245908 LTBP4Q8N2S1 1624 aa24.45■■□□□ 1.51
SH2D3A-201ENST00000245908 DAGLBQ8NCG7 672 aa24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 DYNLL2Q96FJ2 89 aa24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 ARGLU1Q9NWB6 273 aaPredicted RBP24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 RPN1P04843 607 aaKnown RBP24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 GYPCP04921 128 aa24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 KARSQ15046 597 aaKnown RBP24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 SH3RF3Q8TEJ3 882 aaPredicted RBP24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 CPLX3Q8WVH0 158 aa24.45■■□□□ 1.5
SH2D3A-201ENST00000245908 CASP14P31944 242 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 TYW1BQ6NUM6 668 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 GSTO1P78417 241 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 GALNT17Q6IS24 598 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 NELFBQ8WX92 580 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 LEMD3Q9Y2U8 911 aa24.44■■□□□ 1.5
SH2D3A-201ENST00000245908 STAT6P42226 847 aa24.43■■□□□ 1.5
SH2D3A-201ENST00000245908 PPP4CP60510 307 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms