RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 TTC12Q9H892 705 aaPredicted RBP21.15■□□□□ 0.98
HOXC11-201ENST00000243082 BARHL2Q9NY43 387 aa21.15■□□□□ 0.98
HOXC11-201ENST00000243082 SWAP70Q9UH65 585 aa21.15■□□□□ 0.98
HOXC11-201ENST00000243082 PCDHAC2Q9Y5I4 1007 aa21.15■□□□□ 0.98
HOXC11-201ENST00000243082 STXBP3O00186 592 aa21.14■□□□□ 0.98
HOXC11-201ENST00000243082 POLR2DO15514 142 aaKnown RBP21.14■□□□□ 0.98
HOXC11-201ENST00000243082 AOC3Q16853 763 aa21.14■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF646O15015 1829 aaPredicted RBP21.14■□□□□ 0.97
HOXC11-201ENST00000243082 FOXN1O15353 648 aa21.14■□□□□ 0.97
HOXC11-201ENST00000243082 SHMT1P34896 483 aa21.14■□□□□ 0.97
HOXC11-201ENST00000243082 ATP2C1P98194 919 aaPredicted RBP21.14■□□□□ 0.97
HOXC11-201ENST00000243082 HDLBPQ00341 1268 aaKnown RBP21.14■□□□□ 0.97
HOXC11-201ENST00000243082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.14■□□□□ 0.97
HOXC11-201ENST00000243082 ZFPM1Q8IX07 1006 aa21.14■□□□□ 0.97
HOXC11-201ENST00000243082 FERMT2Q96AC1 680 aa21.14■□□□□ 0.97
HOXC11-201ENST00000243082 MYO3BQ8WXR4 1341 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 SMARCA1P28370 1054 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 KIAA2012Q0VF49 1180 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 PTGDRQ13258 359 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 DAGLBQ8NCG7 672 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 SERTAD1Q9UHV2 236 aa21.13■□□□□ 0.97
HOXC11-201ENST00000243082 USP17L5A8MUK1 530 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 ISM2Q6H9L7 571 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 HEATR3Q7Z4Q2 680 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 CCDC148Q8NFR7 591 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 PCDHA5Q9Y5H7 936 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 CC2D2BQ6DHV5 1058 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 GALNT17Q6IS24 598 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 FAM177A1Q8N128 213 aaPredicted RBP21.12■□□□□ 0.97
HOXC11-201ENST00000243082 EPSTI1Q96J88 318 aa21.12■□□□□ 0.97
HOXC11-201ENST00000243082 GOLGA6L6A8MZA4 724 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 ACTN4O43707 911 aaKnown RBP21.11■□□□□ 0.97
HOXC11-201ENST00000243082 HLA-DOAP06340 250 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 PDHBP11177 359 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 RASGRP4Q8TDF6 673 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 PCDHA6Q9UN73 950 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 PCDHA8Q9Y5H6 950 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 TPM3P06753 285 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 CDC25BP30305 580 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 CACNB3P54284 484 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 CLEC10AQ8IUN9 316 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 PDILTQ8N807 584 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 IDI2Q9BXS1 227 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 EHD4Q9H223 541 aa21.11■□□□□ 0.97
HOXC11-201ENST00000243082 A0A087X0B3 334 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 C21orf2O43822 256 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 SLURP2P0DP57 97 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 NCAPHQ15003 741 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 POSTNQ15063 836 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 SYMPKQ92797 1274 aaKnown RBP21.1■□□□□ 0.97
HOXC11-201ENST00000243082 MRFAP1L1Q96HT8 127 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 KCNF1Q9H3M0 494 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 FAM198AQ9UFP1 575 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 HOOK1Q9UJC3 728 aaKnown RBP21.1■□□□□ 0.97
HOXC11-201ENST00000243082 SERPINA10Q9UK55 444 aa21.1■□□□□ 0.97
HOXC11-201ENST00000243082 MYH8P13535 1937 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 MCM7P33993 719 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 EIF6P56537 245 aaKnown RBP21.09■□□□□ 0.97
HOXC11-201ENST00000243082 NT5DC1Q5TFE4 455 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 LRRC47Q8N1G4 583 aaKnown RBP21.09■□□□□ 0.97
HOXC11-201ENST00000243082 C4orf32Q8N8J7 132 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 SUPT20HQ8NEM7 779 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 RRP36Q96EU6 259 aaKnown RBP21.09■□□□□ 0.97
HOXC11-201ENST00000243082 UBA5Q9GZZ9 404 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 ZMYND12Q9H0C1 365 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 RIOX1Q9H6W3 641 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 CLIP2Q9UDT6 1046 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 VWA3AA6NCI4 1184 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 TTLL1O95922 423 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 PRR29P0C7W0 189 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 RBM5P52756 815 aaKnown RBP eCLIP21.09■□□□□ 0.97
HOXC11-201ENST00000243082 IL17AQ16552 155 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 C10orf71Q711Q0 1435 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 DNAJC18Q9H819 358 aa21.09■□□□□ 0.97
HOXC11-201ENST00000243082 YDJCA8MPS7 323 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 BMP6P22004 513 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 SARSP49591 514 aaKnown RBP21.08■□□□□ 0.97
HOXC11-201ENST00000243082 KANK3Q6NY19 840 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 DRC7Q8IY82 874 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 PIGSQ96S52 555 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 VAT1LQ9HCJ6 419 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 NRBP1Q9UHY1 535 aa21.08■□□□□ 0.97
HOXC11-201ENST00000243082 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.96
HOXC11-201ENST00000243082 CCDC194A0A1B0GVG4 234 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 DDTLA6NHG4 134 aaPredicted RBP21.07■□□□□ 0.96
HOXC11-201ENST00000243082 IKBKBO14920 756 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 TCP10Q12799 353 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 ASPRV1Q53RT3 343 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 HOMER1Q86YM7 354 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 GRAMD1CQ8IYS0 662 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 DHX36Q9H2U1 1008 aaKnown RBP21.07■□□□□ 0.96
HOXC11-201ENST00000243082 GOLGB1Q14789 3259 aaKnown RBP21.07■□□□□ 0.96
HOXC11-201ENST00000243082 SMTNL1A8MU46 457 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 PPIP5K2O43314 1243 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 NPM3O75607 178 aaKnown RBP21.07■□□□□ 0.96
HOXC11-201ENST00000243082 PTGS1P23219 599 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 NAPAP54920 295 aa21.07■□□□□ 0.96
HOXC11-201ENST00000243082 SH3BP5LQ7L8J4 393 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms