RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 SLF2Q8IX21 1173 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 C4orf32Q8N8J7 132 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 TBC1D22AQ8WUA7 517 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 GPR101Q96P66 508 aaPredicted RBP18.41■□□□□ 0.54
UBE3D-201ENST00000237186 NFE2L3Q9Y4A8 694 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 UBR3Q6ZT12 1888 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 USP17L3A6NCW0 530 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 USP17L4A6NCW7 530 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 TXNRD1Q16881 649 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 USP17L1Q7RTZ2 530 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF710Q8N1W2 664 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 INTS13Q9NVM9 706 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 GAKO14976 1311 aa18.41■□□□□ 0.54
UBE3D-201ENST00000237186 MYH6P13533 1939 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 VWA3AA6NCI4 1184 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 HMGB2P26583 209 aaKnown RBP18.4■□□□□ 0.54
UBE3D-201ENST00000237186 NOVP48745 357 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 TBX2Q13207 712 aaPredicted RBP18.4■□□□□ 0.54
UBE3D-201ENST00000237186 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 PROM2Q8N271 834 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 IQUBQ8NA54 791 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 TBC1D16Q8TBP0 767 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 TMEM47Q9BQJ4 181 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 FAM205AQ6ZU69 1335 aa18.4■□□□□ 0.54
UBE3D-201ENST00000237186 TOP1P11387 765 aaKnown RBP18.39■□□□□ 0.54
UBE3D-201ENST00000237186 SMARCA1P28370 1054 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 LONP1P36776 959 aaKnown RBP18.39■□□□□ 0.54
UBE3D-201ENST00000237186 RHBDL3P58872 404 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 IL17AQ16552 155 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 ZNF827Q17R98 1081 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 SLC35G1Q2M3R5 365 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 CCDC148Q8NFR7 591 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 NEDD1Q8NHV4 660 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 POLLQ9UGP5 575 aa18.39■□□□□ 0.54
UBE3D-201ENST00000237186 ADAMTS3O15072 1205 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 CYTH3O43739 400 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 RXRBP28702 533 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 CDK8P49336 464 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 CUL4BQ13620 913 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 SLC4A8Q2Y0W8 1093 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 SLC44A5Q8NCS7 719 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 TSC1Q92574 1164 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 BARHL2Q9NY43 387 aa18.39■□□□□ 0.53
UBE3D-201ENST00000237186 POLRMTO00411 1230 aaKnown RBP18.38■□□□□ 0.53
UBE3D-201ENST00000237186 AFMP43652 599 aa18.38■□□□□ 0.53
UBE3D-201ENST00000237186 DDR1Q08345 913 aa18.38■□□□□ 0.53
UBE3D-201ENST00000237186 TYW1BQ6NUM6 668 aa18.38■□□□□ 0.53
UBE3D-201ENST00000237186 TEX11Q8IYF3 940 aa18.38■□□□□ 0.53
UBE3D-201ENST00000237186 SPZ1Q9BXG8 430 aa18.38■□□□□ 0.53
UBE3D-201ENST00000237186 TRMT1Q9NXH9 659 aaKnown RBP18.38■□□□□ 0.53
UBE3D-201ENST00000237186 FLT1P17948 1338 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 TMEM232C9JQI7 657 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 CCP110O43303 1012 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 CDK11BP21127 795 aaKnown RBP18.37■□□□□ 0.53
UBE3D-201ENST00000237186 MCM7P33993 719 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 NR1I3Q14994 352 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 MFSD14BQ5SR56 506 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 SPATA1Q5VX52 437 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 FCHSD1Q86WN1 690 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 SP8Q8IXZ3 490 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 ANKRD7Q92527 254 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 PPP1R13BQ96KQ4 1090 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 SUGT1Q9Y2Z0 365 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 WWC2Q6AWC2 1192 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 PDXDC2PQ6P474 469 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 EYA3Q99504 573 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 STX8Q9UNK0 236 aa18.37■□□□□ 0.53
UBE3D-201ENST00000237186 A0A1B0GTH6 734 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 PPP1R3GB7ZBB8 358 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 STXBP3O00186 592 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 KIF18AQ8NI77 898 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
UBE3D-201ENST00000237186 SAMSN1Q9NSI8 373 aaKnown RBP18.36■□□□□ 0.53
UBE3D-201ENST00000237186 SAP30BPQ9UHR5 308 aaKnown RBP18.36■□□□□ 0.53
UBE3D-201ENST00000237186 PCDHA6Q9UN73 950 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 PCDHA8Q9Y5H6 950 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 SNED1Q8TER0 1413 aa18.36■□□□□ 0.53
UBE3D-201ENST00000237186 LAD1O00515 517 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 PLSCR1O15162 318 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 GTPBP6O43824 516 aaPredicted RBP18.35■□□□□ 0.53
UBE3D-201ENST00000237186 APBA3O96018 575 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
UBE3D-201ENST00000237186 SPECC1LQ69YQ0 1117 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 APTXQ7Z2E3 356 aaKnown RBP18.35■□□□□ 0.53
UBE3D-201ENST00000237186 TRMT44Q8IYL2 757 aaKnown RBP18.35■□□□□ 0.53
UBE3D-201ENST00000237186 ZMYND12Q9H0C1 365 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 KLRF2D3W0D1 207 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
UBE3D-201ENST00000237186 CCDC194A0A1B0GVG4 234 aa18.34■□□□□ 0.53
UBE3D-201ENST00000237186 TMEM139Q8IV31 216 aa18.34■□□□□ 0.53
UBE3D-201ENST00000237186 MTRQ99707 1265 aa18.34■□□□□ 0.53
UBE3D-201ENST00000237186 COA1Q9GZY4 146 aa18.34■□□□□ 0.53
UBE3D-201ENST00000237186 ARHGAP6O43182 974 aa18.33■□□□□ 0.53
UBE3D-201ENST00000237186 TXLNAP40222 546 aa18.33■□□□□ 0.53
UBE3D-201ENST00000237186 PRPHP41219 470 aa18.33■□□□□ 0.53
UBE3D-201ENST00000237186 SEMA3FQ13275 785 aa18.33■□□□□ 0.53
UBE3D-201ENST00000237186 CCDC12Q8WUD4 166 aaPredicted RBP18.33■□□□□ 0.53
UBE3D-201ENST00000237186 PARP1P09874 1014 aaKnown RBP18.33■□□□□ 0.52
UBE3D-201ENST00000237186 CASP1P29466 404 aa18.33■□□□□ 0.52
UBE3D-201ENST00000237186 DTHD1Q6ZMT9 781 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms