RNA–Protein interactions for RNA: ENST00000235349.5

PRAMEF4-201, Transcript of PRAME family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF4, Length 1,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4-201ENST00000235349 CCDC84Q86UT8 332 aaPredicted RBP11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 MKL1Q969V6 931 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 MAP3K14Q99558 947 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 KANSL2Q9H9L4 492 aa11.73□□□□□ -0.53
PRAMEF4-201ENST00000235349 CNTNAP5Q8WYK1 1306 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 A0A1W2PRG0 241 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 PRPF3O43395 683 aaKnown RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 PDHBP11177 359 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 CAP2P40123 477 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 SASS6Q6UVJ0 657 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 APOBEC3FQ8IUX4 373 aaKnown RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 FBXO18Q8NFZ0 1043 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 ACER1Q8TDN7 264 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 L3MBTL3Q96JM7 780 aaPredicted RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 CABP5Q9NP86 173 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 NYAP2Q9P242 653 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 FRMPD2Q68DX3 1309 aaPredicted RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 STK36Q9NRP7 1315 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 KLRF2D3W0D1 207 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 CYTH3O43739 400 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 PARP1P09874 1014 aaKnown RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 KIF5BP33176 963 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 ICA1Q05084 483 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 RESTQ13127 1097 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 GTPBP4Q9BZE4 634 aaKnown RBP11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 UBA5Q9GZZ9 404 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 RBSNQ9H1K0 784 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 GPCPD1Q9NPB8 672 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 ZBTB21Q9ULJ3 1066 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 KIF3AQ9Y496 699 aa11.72□□□□□ -0.53
PRAMEF4-201ENST00000235349 SMCHD1A6NHR9 2005 aa11.71□□□□□ -0.53
PRAMEF4-201ENST00000235349 SNHG28P0DPA3 235 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 EPHX2P34913 555 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 ECE1P42892 770 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 KIAA1755Q5JYT7 1200 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 KRT40Q6A162 431 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 TRIM22Q8IYM9 498 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 CCDC94Q9BW85 323 aaPredicted RBP11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 VAT1LQ9HCJ6 419 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 KCNJ14Q9UNX9 436 aa11.71□□□□□ -0.54
PRAMEF4-201ENST00000235349 MYH15Q9Y2K3 1946 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 KIF28PB7ZC32 967 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 ADM5C9JUS6 153 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 RAD21O60216 631 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 DEXIO95424 95 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 INPP5BP32019 993 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 DNM1Q05193 864 aaKnown RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 UVSSAQ2YD98 709 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 KCTD1Q719H9 257 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 GLIS2Q9BZE0 524 aaPredicted RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 GDPD2Q9HCC8 539 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 TFIP11Q9UBB9 837 aaKnown RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 CNPY2Q9Y2B0 182 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 F5H6K3 240 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 GNAQP50148 359 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 AKAP17AQ02040 695 aaKnown RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 KLRC3Q07444 240 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 ZNF543Q08ER8 600 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 PRKG1Q13976 671 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 SLFN13Q68D06 897 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 DCPSQ96C86 337 aaKnown RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 NUP88Q99567 741 aaPredicted RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 TAF1DQ9H5J8 278 aaPredicted RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 VPS54Q9P1Q0 977 aa11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 R3HCC1Q9Y3T6 440 aaKnown RBP11.7□□□□□ -0.54
PRAMEF4-201ENST00000235349 SCN4AP35499 1836 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 ADAMTS3O15072 1205 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 KIF20AO95235 890 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 PDIA4P13667 645 aaKnown RBP11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 SLC16A2P36021 539 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 USP50Q70EL3 339 aaPredicted RBP11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 ZKSCAN4Q969J2 545 aaPredicted RBP11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 FAM13BQ9NYF5 915 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 ZNF112Q9UJU3 913 aa11.69□□□□□ -0.54
PRAMEF4-201ENST00000235349 SSC5DA1L4H1 1573 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 ZC3H4Q9UPT8 1303 aaKnown RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 UQCRHLA0A096LP55 91 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 PRPF40AO75400 957 aaKnown RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 USP2O75604 605 aaPredicted RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 NDUFB10O96000 172 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 UQCRHP07919 91 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 POTEIP0CG38 1075 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 KIF23Q02241 960 aaPredicted RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 PFKFB3Q16875 520 aaPredicted RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 CCDC96Q2M329 555 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 EAPPQ56P03 285 aaPredicted RBP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 PPP4R3BQ5MIZ7 849 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 SPICE1Q8N0Z3 855 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 WASF1Q92558 559 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 GPKOWQ92917 476 aaPredicted RBP eCLIP11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 ZNF341Q9BYN7 854 aa11.68□□□□□ -0.54
PRAMEF4-201ENST00000235349 CTNND1O60716 968 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms