RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 ANKS1AQ92625 1134 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 ZKSCAN3Q9BRR0 538 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 PAGR1Q9BTK6 254 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 MOV10L1Q9BXT6 1211 aaKnown RBP16.25■□□□□ 0.19
VEGFA-201ENST00000230480 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 BRCA2P51587 3418 aa16.25■□□□□ 0.19
VEGFA-201ENST00000230480 KDM4AO75164 1064 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 FCGRTP55899 365 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 MORN1Q5T089 497 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 SH3TC2Q8TF17 1288 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 RUFY2Q8WXA3 655 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 ZNF333Q96JL9 665 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 SENP2Q9HC62 589 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 HOXC10Q9NYD6 342 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 ZNF214Q9UL59 606 aaPredicted RBP16.24■□□□□ 0.19
VEGFA-201ENST00000230480 PPP1R9AQ9ULJ8 1098 aa16.24■□□□□ 0.19
VEGFA-201ENST00000230480 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
VEGFA-201ENST00000230480 MYPNQ86TC9 1320 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 VWA5AO00534 786 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 FLOT1O75955 427 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
VEGFA-201ENST00000230480 MCCP23508 829 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 RGS19P49795 217 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 ANTXR2P58335 489 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 IRF5Q13568 498 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 SEC23AQ15436 765 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 GMCL1Q96IK5 515 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 SH2D4AQ9H788 454 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 GOPCQ9HD26 462 aa16.23■□□□□ 0.19
VEGFA-201ENST00000230480 RBBP6Q7Z6E9 1792 aaKnown RBP16.23■□□□□ 0.19
VEGFA-201ENST00000230480 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
VEGFA-201ENST00000230480 SNHG28P0DPA3 235 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 TRIM32Q13049 653 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 KIF22Q14807 665 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 IMMTQ16891 758 aaKnown RBP16.22■□□□□ 0.19
VEGFA-201ENST00000230480 TTBK2Q6IQ55 1244 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 CTNNA3Q9UI47 895 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 STX8Q9UNK0 236 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 RIPK3Q9Y572 518 aa16.22■□□□□ 0.19
VEGFA-201ENST00000230480 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
VEGFA-201ENST00000230480 ZNF536O15090 1300 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 POTEFA5A3E0 1075 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 E7EWF7 191 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 TOP1P11387 765 aaKnown RBP16.21■□□□□ 0.19
VEGFA-201ENST00000230480 ELNP15502 786 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 PRMT2P55345 433 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 MTFR1Q15390 333 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 SLC35G1Q2M3R5 365 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 ENAHQ8N8S7 591 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-201ENST00000230480 GTF3C2Q8WUA4 911 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-201ENST00000230480 TTC14Q96N46 770 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 ANP32EQ9BTT0 268 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 SPATC1LQ9H0A9 340 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 RNF41Q9H4P4 317 aaPredicted RBP16.21■□□□□ 0.19
VEGFA-201ENST00000230480 TOMM22Q9NS69 142 aa16.21■□□□□ 0.19
VEGFA-201ENST00000230480 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
VEGFA-201ENST00000230480 SLC27A2O14975 620 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 CDC45O75419 566 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 BMP3P12645 472 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 CCL14Q16627 93 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 KCTD1Q719H9 257 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 DGKHQ86XP1 1220 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 MB21D2Q8IYB1 491 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-201ENST00000230480 RASEFQ8IZ41 740 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 ESR2Q92731 530 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 GPHNQ9NQX3 736 aaPredicted RBP16.2■□□□□ 0.18
VEGFA-201ENST00000230480 FLRT1Q9NZU1 646 aa16.2■□□□□ 0.18
VEGFA-201ENST00000230480 ZNF236Q9UL36 1845 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 TMEM232C9JQI7 657 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 ADCY3O60266 1144 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 PLA2G6O60733 806 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 COBLO75128 1261 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 PDHBP11177 359 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 TAL1P17542 331 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-201ENST00000230480 ERCC3P19447 782 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 PTPREP23469 700 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 SOX10P56693 466 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 MLLT1Q03111 559 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-201ENST00000230480 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 PLEKHH3Q7Z736 793 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 NPLOC4Q8TAT6 608 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 TRIB2Q92519 343 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 KCNB2Q92953 911 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 ZSCAN10Q96SZ4 725 aaPredicted RBP16.19■□□□□ 0.18
VEGFA-201ENST00000230480 SLC38A10Q9HBR0 1119 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 LCTP09848 1927 aa16.19■□□□□ 0.18
VEGFA-201ENST00000230480 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 RAD21O60216 631 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 HOXD10P28358 340 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 MAPK4P31152 587 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 GRK4P32298 578 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 SNAP25P60880 206 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 GRB14Q14449 540 aa16.18■□□□□ 0.18
VEGFA-201ENST00000230480 ARHGEF6Q15052 776 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms