RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 IL17RBQ9NRM6 502 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 ANKIB1Q9P2G1 1089 aa24.93■■□□□ 1.58
SMARCD2-201ENST00000225742 AKR1B15C9JRZ8 316 aaPredicted RBP24.92■■□□□ 1.58
SMARCD2-201ENST00000225742 CD44P16070 742 aaKnown RBP24.92■■□□□ 1.58
SMARCD2-201ENST00000225742 PTF1AQ7RTS3 328 aa24.92■■□□□ 1.58
SMARCD2-201ENST00000225742 MKNK2Q9HBH9 465 aa24.92■■□□□ 1.58
SMARCD2-201ENST00000225742 DNAI1Q9UI46 699 aa24.92■■□□□ 1.58
SMARCD2-201ENST00000225742 NPHP1O15259 732 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 TRAPPC3LQ5T215 181 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 C4orf32Q8N8J7 132 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 C8orf37Q96NL8 207 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 ADD3Q9UEY8 706 aaKnown RBP24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 MCM7P33993 719 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 RFC4P35249 363 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 PBX1P40424 430 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 SPAG1Q07617 926 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 HSP90AA4PQ58FG1 418 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 SH3RF3Q8TEJ3 882 aaPredicted RBP24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 RWDD2AQ9UIY3 292 aa24.91■■□□□ 1.58
SMARCD2-201ENST00000225742 ITIH6Q6UXX5 1313 aa24.9■■□□□ 1.58
SMARCD2-201ENST00000225742 PPFIBP1Q86W92 1011 aa24.9■■□□□ 1.58
SMARCD2-201ENST00000225742 ZNF444Q8N0Y2 327 aaPredicted RBP24.9■■□□□ 1.58
SMARCD2-201ENST00000225742 CCDC51Q96ER9 411 aa24.9■■□□□ 1.58
SMARCD2-201ENST00000225742 DDX41Q9UJV9 622 aaKnown RBP24.9■■□□□ 1.58
SMARCD2-201ENST00000225742 M0R2N6 131 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 LAD1O00515 517 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 CBX1P83916 185 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 GOLGA8FQ08AF8 430 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 GOLGA8DPQ0D2H9 430 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 IL17AQ16552 155 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 MAD2L2Q9UI95 211 aa24.89■■□□□ 1.58
SMARCD2-201ENST00000225742 TSPY3P0CV98 308 aa24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 TSPY8P0CW00 308 aa24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 ELF2Q15723 593 aa24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 KLHL10Q6JEL2 608 aa24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 CCDC24Q8N4L8 307 aa24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 LIMA1Q9UHB6 759 aaKnown RBP24.89■■□□□ 1.57
SMARCD2-201ENST00000225742 CCDC194A0A1B0GVG4 234 aa24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 MYL1P05976 194 aa24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 ADRA2BP18089 450 aa24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 ADKP55263 362 aaKnown RBP24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 ZNF658Q5TYW1 1059 aaPredicted RBP24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 CNBD1Q8NA66 436 aa24.88■■□□□ 1.57
SMARCD2-201ENST00000225742 PALM3A6NDB9 673 aaPredicted RBP24.87■■□□□ 1.57
SMARCD2-201ENST00000225742 LRRC10BA6NIK2 292 aa24.87■■□□□ 1.57
SMARCD2-201ENST00000225742 DYNLL2Q96FJ2 89 aa24.87■■□□□ 1.57
SMARCD2-201ENST00000225742 TPM1P09493 284 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 PLCG2P16885 1265 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 NFIXQ14938 502 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 RRAGBQ5VZM2 374 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 IGSF22Q8N9C0 903 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 ANKRD20A12PQ8NF67 263 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 CTNND2Q9UQB3 1225 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 JAG2Q9Y219 1238 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 VEGFAP15692 232 aaPredicted RBP24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 ATP2B4P23634 1241 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 SMARCA1P28370 1054 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 CASP1P29466 404 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 PRPHP41219 470 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 STX17P56962 302 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 KMT5BQ4FZB7 885 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 DTHD1Q6ZMT9 781 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 STAG2Q8N3U4 1231 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 CERKQ8TCT0 537 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 BARHL2Q9NY43 387 aa24.86■■□□□ 1.57
SMARCD2-201ENST00000225742 TEX33O43247 280 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 RPN1P04843 607 aaKnown RBP24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 CASQ1P31415 396 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 PAK1Q13153 545 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 PTPN21Q16825 1174 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 CNGA4Q8IV77 575 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 CCDC12Q8WUD4 166 aaPredicted RBP24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 SPZ1Q9BXG8 430 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 RTFDC1Q9BY42 306 aaPredicted RBP24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 PCDHA6Q9UN73 950 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 PCDHA8Q9Y5H6 950 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 FAM205AQ6ZU69 1335 aa24.85■■□□□ 1.57
SMARCD2-201ENST00000225742 CCDC175P0C221 793 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 FECHP22830 423 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 STAT6P42226 847 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 SLF2Q8IX21 1173 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 TGFBRAP1Q8WUH2 860 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 GPKOWQ92917 476 aaPredicted RBP eCLIP24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 TMEM47Q9BQJ4 181 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 CCSER1Q9C0I3 900 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 CDK5RAP2Q96SN8 1893 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 GPR75-ASB3A0A0A6YYF3 556 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 STXBP3O00186 592 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 H2AFXP16104 143 aaPredicted RBP24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 RASA1P20936 1047 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 TRIM14Q14142 442 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 WWC2Q6AWC2 1192 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 FBXO38Q6PIJ6 1188 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 TOGARAM2Q6ZUX3 1019 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 AMIGO3Q86WK7 504 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 MNS1Q8NEH6 495 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 RPGRQ92834 1020 aaKnown RBP24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 MTRQ99707 1265 aa24.84■■□□□ 1.57
SMARCD2-201ENST00000225742 MAGEF1Q9HAY2 307 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms