RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 EPSTI1Q96J88 318 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 TNNT1P13805 278 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 U2AF2P26368 475 aaKnown RBP eCLIP11.4□□□□□ -0.585e-8■■■□□ 19.2
USP11-201ENST00000218348 PKN1Q16512 942 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 ATL3Q6DD88 541 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 DHX58Q96C10 678 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 KAT14Q9H8E8 782 aa11.4□□□□□ -0.58
USP11-201ENST00000218348 C21orf2O43822 256 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 MCM7P33993 719 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 CACNB3P54284 484 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 KLHL10Q6JEL2 608 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.59
USP11-201ENST00000218348 JMYQ8N9B5 988 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 KRI1Q8N9T8 703 aaKnown RBP11.4□□□□□ -0.59
USP11-201ENST00000218348 TDRD7Q8NHU6 1098 aaKnown RBP11.4□□□□□ -0.59
USP11-201ENST00000218348 PLIN2Q99541 437 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 TRMT1Q9NXH9 659 aaKnown RBP11.4□□□□□ -0.59
USP11-201ENST00000218348 IFNKQ9P0W0 207 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 SERTAD1Q9UHV2 236 aa11.4□□□□□ -0.59
USP11-201ENST00000218348 A0A1W2PQ27 194 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 A0A1W2PQ64 194 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 A0A1W2PQD8 194 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 GOLGA6L6A8MZA4 724 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 ZNF500O60304 480 aaPredicted RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 GOLGA8FQ08AF8 430 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 GOLGA8DPQ0D2H9 430 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 WDR66Q8TBY9 1149 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 CACTINQ8WUQ7 758 aaKnown RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 C16orf45Q96MC5 204 aaPredicted RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 CSRNP2Q9H175 543 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 KCNQ5Q9NR82 932 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 VWA3AA6NCI4 1184 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 SPTY2D1Q68D10 685 aaPredicted RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 FOXP4Q8IVH2 680 aaPredicted RBP11.39□□□□□ -0.59
USP11-201ENST00000218348 PNMA1Q8ND90 353 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 VPS33BQ9H267 617 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 IL17RBQ9NRM6 502 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
USP11-201ENST00000218348 FAM196BA6NMK8 535 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 YDJCA8MPS7 323 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 ATP8A2Q9NTI2 1148 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 BAG3O95817 575 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 HEATR3Q7Z4Q2 680 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 METTL16Q86W50 562 aaKnown RBP11.38□□□□□ -0.59
USP11-201ENST00000218348 DBNDD1Q9H9R9 158 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 WDR90Q96KV7 1748 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 SEMA3EO15041 775 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 XBP1P17861 261 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 KRT2P35908 639 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 RCSD1Q6JBY9 416 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 UBA5Q9GZZ9 404 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 PCDHAC2Q9Y5I4 1007 aa11.38□□□□□ -0.59
USP11-201ENST00000218348 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 STX17P56962 302 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 C12orf60Q5U649 245 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 USP17L2Q6R6M4 530 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 TMTC3Q6ZXV5 915 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 TMC6Q7Z403 805 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 AMOTL1Q8IY63 956 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 SMYD4Q8IYR2 804 aaPredicted RBP11.37□□□□□ -0.59
USP11-201ENST00000218348 ARPP21Q9UBL0 812 aaPredicted RBP11.37□□□□□ -0.59
USP11-201ENST00000218348 PAPPA2Q9BXP8 1791 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 CAPN2P17655 700 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 TCP10Q12799 353 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 XPO4Q9C0E2 1151 aaKnown RBP11.37□□□□□ -0.59
USP11-201ENST00000218348 NAT10Q9H0A0 1025 aaKnown RBP11.37□□□□□ -0.59
USP11-201ENST00000218348 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP11-201ENST00000218348 SIPA1L1O43166 1804 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 RBM5P52756 815 aaKnown RBP eCLIP11.37□□□□□ -0.59
USP11-201ENST00000218348 FUT2Q10981 343 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 CCDC93Q567U6 631 aa11.37□□□□□ -0.59
USP11-201ENST00000218348 RNF26Q9BY78 433 aaPredicted RBP11.37□□□□□ -0.59
USP11-201ENST00000218348 PLA2G4DQ86XP0 818 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 EGFL6Q8IUX8 553 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 RTKN2Q8IZC4 609 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 ZC3H12CQ9C0D7 883 aaKnown RBP11.36□□□□□ -0.59
USP11-201ENST00000218348 FRMPD2Q68DX3 1309 aaPredicted RBP11.36□□□□□ -0.59
USP11-201ENST00000218348 FAM205AQ6ZU69 1335 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 CUTAO60888 179 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 SERPINC1P01008 464 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 TNNT3P45378 269 aaPredicted RBP11.36□□□□□ -0.59
USP11-201ENST00000218348 PTGDRQ13258 359 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 RILPL1Q5EBL4 403 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 RESP18Q5W5W9 173 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 KRBA2Q6ZNG9 492 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 LRRC47Q8N1G4 583 aaKnown RBP11.36□□□□□ -0.59
USP11-201ENST00000218348 RASSF8Q8NHQ8 419 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 BLZF1Q9H2G9 400 aa11.36□□□□□ -0.59
USP11-201ENST00000218348 FBXO2Q9UK22 296 aaPredicted RBP11.36□□□□□ -0.59
USP11-201ENST00000218348 A0A087X0B3 334 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 TYW1BQ6NUM6 668 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 KIAA0825Q8IV33 1275 aa11.35□□□□□ -0.59
USP11-201ENST00000218348 EYA3Q99504 573 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms