RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 DAGLBQ8NCG7 672 aa19.91■□□□□ 0.78
VRK1-201ENST00000216639 FAM205CA6NFA0 338 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 GOLGA6L19H0YKK7 550 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 MPHOSPH10O00566 681 aaKnown RBP19.9■□□□□ 0.78
VRK1-201ENST00000216639 PDHBP11177 359 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 KCNA3P22001 575 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 TGFB2P61812 414 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 TCP10Q12799 353 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 WWC2Q6AWC2 1192 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 FOXP4Q8IVH2 680 aaPredicted RBP19.9■□□□□ 0.78
VRK1-201ENST00000216639 ELOA2Q8IYF1 753 aaPredicted RBP19.9■□□□□ 0.78
VRK1-201ENST00000216639 CLIP2Q9UDT6 1046 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 FAM198AQ9UFP1 575 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 HDAC9Q9UKV0 1011 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 hCG_1984214I3L0E3 225 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 STXBP3O00186 592 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 ENTPD3O75355 529 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 CACNB3P54284 484 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 RSBN1LQ6PCB5 846 aaPredicted RBP19.9■□□□□ 0.78
VRK1-201ENST00000216639 ZNF713Q8N859 430 aaPredicted RBP19.9■□□□□ 0.78
VRK1-201ENST00000216639 CNNM3Q8NE01 707 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 TMOD2Q9NZR1 351 aa19.9■□□□□ 0.78
VRK1-201ENST00000216639 KIF13BQ9NQT8 1826 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 CCDC194A0A1B0GVG4 234 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 USP17L5A8MUK1 530 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 VEGFAP15692 232 aaPredicted RBP19.89■□□□□ 0.77
VRK1-201ENST00000216639 POLD1P28340 1107 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 KRBA2Q6ZNG9 492 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 ZFPM1Q8IX07 1006 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 CCDC34Q96HJ3 373 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 PIM2Q9P1W9 311 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 PCDHAC2Q9Y5I4 1007 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 PSME4Q14997 1843 aa19.89■□□□□ 0.77
VRK1-201ENST00000216639 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 BECN2A8MW95 431 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 SNHG28P0DPA3 235 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 ZNF174Q15697 407 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 SLC35G1Q2M3R5 365 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 ZSCAN30Q86W11 494 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 LRRC47Q8N1G4 583 aaKnown RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 TDRD3Q9H7E2 651 aaKnown RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 C6orf50Q9HD87 102 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 COL2A1P02458 1487 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 DDTLA6NHG4 134 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 VIL1P09327 827 aaKnown RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 GNA11P29992 359 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 NAPAP54920 295 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 EIF6P56537 245 aaKnown RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 CERKLQ49MI3 558 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 KANK3Q6NY19 840 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 C11orf57Q6ZUT1 292 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 OGFOD1Q8N543 542 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 RIOX1Q9H6W3 641 aa19.88■□□□□ 0.77
VRK1-201ENST00000216639 ZNF277Q9NRM2 450 aaPredicted RBP19.88■□□□□ 0.77
VRK1-201ENST00000216639 MSNP26038 577 aaKnown RBP19.87■□□□□ 0.77
VRK1-201ENST00000216639 NLRP12P59046 1061 aa19.87■□□□□ 0.77
VRK1-201ENST00000216639 ATP2C1P98194 919 aaPredicted RBP19.87■□□□□ 0.77
VRK1-201ENST00000216639 GPATCH4Q5T3I0 446 aaKnown RBP19.87■□□□□ 0.77
VRK1-201ENST00000216639 HOMER1Q86YM7 354 aa19.87■□□□□ 0.77
VRK1-201ENST00000216639 NIM1KQ8IY84 436 aa19.87■□□□□ 0.77
VRK1-201ENST00000216639 ZMYND12Q9H0C1 365 aa19.87■□□□□ 0.77
VRK1-201ENST00000216639 CSRNP2Q9H175 543 aa19.87■□□□□ 0.77
VRK1-201ENST00000216639 ATRNL1Q5VV63 1379 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 LONRF3Q496Y0 759 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 SPECC1Q5M775 1068 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 TYW1BQ6NUM6 668 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 ERCC4Q92889 916 aaPredicted RBP19.86■□□□□ 0.77
VRK1-201ENST00000216639 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
VRK1-201ENST00000216639 KANSL2Q9H9L4 492 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 VAT1LQ9HCJ6 419 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 PCDHA6Q9UN73 950 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 PCDHA8Q9Y5H6 950 aa19.86■□□□□ 0.77
VRK1-201ENST00000216639 FRMPD2Q68DX3 1309 aaPredicted RBP19.86■□□□□ 0.77
VRK1-201ENST00000216639 GREB1LQ9C091 1923 aaPredicted RBP19.86■□□□□ 0.77
VRK1-201ENST00000216639 M0R2N6 131 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 PSMD14O00487 310 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 RAD17O75943 681 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 ATP2B2Q01814 1243 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 GRIN1Q05586 938 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 ZNF543Q08ER8 600 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 PTGDRQ13258 359 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 IQCB1Q15051 598 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 NOM1Q5C9Z4 860 aaKnown RBP19.85■□□□□ 0.77
VRK1-201ENST00000216639 TATDN1Q6P1N9 297 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 RASGRP2Q7LDG7 609 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 PIGSQ96S52 555 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 BPIFA3Q9BQP9 254 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 DNAJC18Q9H819 358 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 BAZ2BQ9UIF8 2168 aaKnown RBP19.85■□□□□ 0.77
VRK1-201ENST00000216639 TUBE1Q9UJT0 475 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 ZNRF3Q9ULT6 936 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 POLR2DO15514 142 aaKnown RBP19.85■□□□□ 0.77
VRK1-201ENST00000216639 ZBTB7AO95365 584 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 DLGAP5Q15398 846 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 TMEM179Q6ZVK1 233 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 SH3BP5LQ7L8J4 393 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 KRT25Q7Z3Z0 450 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 UBA5Q9GZZ9 404 aa19.85■□□□□ 0.77
VRK1-201ENST00000216639 CPVLQ9H3G5 476 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms