RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 ABCA8O94911 1581 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 CDK12Q9NYV4 1490 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 TARBP1Q13395 1621 aaKnown RBP9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 FNTAP49354 379 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 TIMM10P62072 90 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 CFAP221Q4G0U5 840 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 TMEM67Q5HYA8 995 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 CACNA2D4Q7Z3S7 1137 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 SPATA4Q8NEY3 305 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 IL17REQ8NFR9 667 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 ZNF483Q8TF39 744 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 ATP6V1G3Q96LB4 118 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 ZNF330Q9Y3S2 320 aaPredicted RBP9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 HYOU1Q9Y4L1 999 aa9.73□□□□□ -0.85
SUPT16H-201ENST00000216297 HMGB1P1B2RPK0 211 aaPredicted RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 IFIT3O14879 490 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 SCTRP47872 440 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TYW1BQ6NUM6 668 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 LMOD2Q6P5Q4 547 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 PLPPR3Q6T4P5 718 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 UBE3BQ7Z3V4 1068 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TSEN2Q8NCE0 465 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 NELFBQ8WX92 580 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 KRT12Q99456 494 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TRIM4Q9C037 500 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TMX4Q9H1E5 349 aaPredicted RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 LRWD1Q9UFC0 647 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 SWAP70Q9UH65 585 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TRPC6Q9Y210 931 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 ARHGEF10O15013 1369 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 PHF20L1A8MW92 1017 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 BUB1O43683 1085 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 MOCS3O95396 460 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 SLC8A3P57103 927 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 RCSD1Q6JBY9 416 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 SEC16BQ96JE7 1060 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TSGA10Q9BZW7 698 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 NOVA2Q9UNW9 492 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 ABCC3O15438 1527 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 GRIN2DO15399 1336 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TCP1P17987 556 aaKnown RBP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 BMP6P22004 513 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 NFRKBQ6P4R8 1299 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 LINS1Q8NG48 757 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 CCDC26Q8TAB7 109 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 DSCC1Q9BVC3 393 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 HELLSQ9NRZ9 838 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 EHD2Q9NZN4 543 aa9.72□□□□□ -0.85
SUPT16H-201ENST00000216297 TTC26A0AVF1 554 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 PSMD14O00487 310 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 CTNND1O60716 968 aaKnown RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 ZNF18P17022 549 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 USPL1Q5W0Q7 1092 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 ZNF513Q8N8E2 541 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 MMRN2Q9H8L6 949 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 INO80Q9ULG1 1556 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 TRIM75PA6NK02 468 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 NUTM2BA6NNL0 878 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 NUTM2EB1AL46 878 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 LRRC23Q53EV4 343 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 ZNF530Q6P9A1 599 aaPredicted RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 FBF1Q8TES7 1133 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 LUC7LQ9NQ29 371 aaKnown RBP9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 MED23Q9ULK4 1368 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 ATP7BP35670 1465 aa9.71□□□□□ -0.85
SUPT16H-201ENST00000216297 RNF113AO15541 343 aaKnown RBP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 KCNQ3O43525 872 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 LUC7L3O95232 432 aaKnown RBP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 PDHA1P08559 390 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 RBM5P52756 815 aaKnown RBP eCLIP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 RILPL1Q5EBL4 403 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 KDM7AQ6ZMT4 941 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 PROSER2Q86WR7 435 aaPredicted RBP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 SH3GL2Q99962 352 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 CSRNP2Q9H175 543 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 DUSP10Q9Y6W6 482 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 PREX2Q70Z35 1606 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 MRC2Q9UBG0 1479 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 EVI5O60447 810 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 MAGEA1P43355 309 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 CARSP49589 748 aaKnown RBP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 SKOR1P84550 965 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 NOSTRINQ8IVI9 506 aa9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 FNBP4Q8N3X1 1017 aaPredicted RBP9.71□□□□□ -0.86
SUPT16H-201ENST00000216297 KLHL33A6NCF5 533 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 PDE2AO00408 941 aaPredicted RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 ATP6V1G2O95670 118 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 OR2W6PQ8NHA6 318 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 LRRC45Q96CN5 670 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 TRIM31Q9BZY9 425 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 NSRP1Q9H0G5 558 aaKnown RBP9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 GGT7Q9UJ14 662 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 SH3BP1Q9Y3L3 701 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 CD2APQ9Y5K6 639 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 ATP5J2-PTCD1G3V325 749 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 NCK2O43639 380 aa9.7□□□□□ -0.86
SUPT16H-201ENST00000216297 PTCD1O75127 700 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms