RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 hCG_1642624A0A1W2PR95 340 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 NDUFB10O96000 172 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 PTMSP20962 102 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 SLFN13Q68D06 897 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 C2orf69Q8N8R5 385 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 GPCPD1Q9NPB8 672 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 MAD2L2Q9UI95 211 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 TMX2Q9Y320 296 aa11.57□□□□□ -0.56
RTCB-201ENST00000216038 MYH6P13533 1939 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 TRAK2O60296 914 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 PARP1P09874 1014 aaKnown RBP11.56□□□□□ -0.56
RTCB-201ENST00000216038 CALM1P0DP23 149 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 CALM2P0DP24 149 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 CALM3P0DP25 149 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 SLC1A4P43007 532 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 MKRN3Q13064 507 aaKnown RBP11.56□□□□□ -0.56
RTCB-201ENST00000216038 MAP3K11Q16584 847 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 CCDC96Q2M329 555 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 PPP4R3BQ5MIZ7 849 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 NOL9Q5SY16 702 aaKnown RBP11.56□□□□□ -0.56
RTCB-201ENST00000216038 SAMD1Q6SPF0 538 aaPredicted RBP11.56□□□□□ -0.56
RTCB-201ENST00000216038 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.56□□□□□ -0.56
RTCB-201ENST00000216038 ZNF280CQ8ND82 737 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 UBA5Q9GZZ9 404 aa11.56□□□□□ -0.56
RTCB-201ENST00000216038 PTPDC1A2A3K4 754 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 USP17L10C9JJH3 530 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 IRF6O14896 467 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 SLC16A2P36021 539 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 FOSBP53539 338 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 HMGCS2P54868 508 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 GRM4Q14833 912 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 NTRK3Q16288 839 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 TTBK2Q6IQ55 1244 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 SRBD1Q8N5C6 995 aaKnown RBP11.55□□□□□ -0.56
RTCB-201ENST00000216038 SMC1BQ8NDV3 1235 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 NSUN7Q8NE18 718 aaKnown RBP11.55□□□□□ -0.56
RTCB-201ENST00000216038 GOPCQ9HD26 462 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 PTPRFP10586 1907 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 KLRF2D3W0D1 207 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 DHX16O60231 1041 aaKnown RBP11.55□□□□□ -0.56
RTCB-201ENST00000216038 OFD1O75665 1012 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 TOMM70O94826 608 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 GJB2P29033 226 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 KIF5BP33176 963 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 FAM83BQ5T0W9 1011 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 LDLRAD1Q5T700 205 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 GMCL1P1Q8NEA9 526 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 OPTNQ96CV9 577 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 SLC26A6Q9BXS9 759 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 VCPKMTQ9H867 229 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 VAT1LQ9HCJ6 419 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 GINM1Q9NU53 330 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 SMC3Q9UQE7 1217 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 AFG3L2Q9Y4W6 797 aa11.55□□□□□ -0.56
RTCB-201ENST00000216038 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.55□□□□□ -0.56
RTCB-201ENST00000216038 PASKQ96RG2 1323 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 CCDC196A0A1B0GTZ2 297 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 PALM3A6NDB9 673 aaPredicted RBP11.54□□□□□ -0.56
RTCB-201ENST00000216038 SNHG28P0DPA3 235 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 BACE1P56817 501 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 HUNKP57058 714 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 ZNF543Q08ER8 600 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 IKQ13123 557 aaPredicted RBP11.54□□□□□ -0.56
RTCB-201ENST00000216038 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 TMTC3Q6ZXV5 915 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 WDR18Q9BV38 432 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 AS3MTQ9HBK9 375 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 EMILIN3Q9NT22 766 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 NID2Q14112 1375 aa11.54□□□□□ -0.56
RTCB-201ENST00000216038 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 RCAN1P53805 252 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 UTP14CQ5TAP6 766 aaKnown RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 ERO1BQ86YB8 467 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 INTS4Q96HW7 963 aaKnown RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 AIFM3Q96NN9 605 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 KIAA1683Q9H0B3 1180 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 RBM28Q9NW13 759 aaKnown RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 V9GY48 417 aaPredicted RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 SPDYE5A6NIY4 337 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 CYTH3O43739 400 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 BMP3P12645 472 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 FDPSP14324 419 aaKnown RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 IFNAR1P17181 557 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 GJA5P36382 358 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 SNAP25P60880 206 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 FUT2Q10981 343 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 CPLX2Q6PUV4 134 aaKnown RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 DCAF4Q8WV16 495 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 GMCL1Q96IK5 515 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 GJB4Q9NTQ9 266 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 FBXO28Q9NVF7 368 aa11.53□□□□□ -0.56
RTCB-201ENST00000216038 ORC3Q9UBD5 711 aaPredicted RBP11.53□□□□□ -0.56
RTCB-201ENST00000216038 VCAM1P19320 739 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 FKBP1BP68106 108 aa11.52□□□□□ -0.56
RTCB-201ENST00000216038 PPATQ06203 517 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms