RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 FBXO18Q8NFZ0 1043 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 SFMBT2Q5VUG0 894 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 ASIC3Q9UHC3 531 aa20.89■□□□□ 0.93
MBD3-201ENST00000156825 E7EVH7 732 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 UBE3CQ15386 1083 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 CCDC121Q6ZUS5 278 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 ANKS4BQ8N8V4 417 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 PGBD1Q96JS3 809 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 HINFPQ9BQA5 517 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 STAP2Q9UGK3 403 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 ERBB3P21860 1342 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 NEK8Q86SG6 692 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 NBPF11Q86T75 865 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 IFIH1Q9BYX4 1025 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 PUS7LQ9H0K6 701 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 BRDTQ58F21 947 aaPredicted RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 SLFN13Q68D06 897 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 KCNJ18B7U540 433 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 SNAP23O00161 211 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 VIMP08670 466 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 KCNJ12Q14500 433 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 PCDHA1Q9Y5I3 950 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 ERBB4Q15303 1308 aa20.88■□□□□ 0.93
MBD3-201ENST00000156825 ATP2A2P16615 1042 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 LSM14BQ9BX40 385 aaKnown RBP20.88■□□□□ 0.93
MBD3-201ENST00000156825 IL6STP40189 918 aaPredicted RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 SLC8A3P57103 927 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 SLFNL1Q499Z3 407 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 LIN9Q5TKA1 542 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 CCDC84Q86UT8 332 aaPredicted RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 GAS2L3Q86XJ1 694 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 SYMPKQ92797 1274 aaKnown RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 GPR101Q96P66 508 aaPredicted RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 FAM204AQ9H8W3 233 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 SRP68Q9UHB9 627 aaKnown RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 KDM6BO15054 1643 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 DKC1O60832 514 aaKnown RBP eCLIP20.87■□□□□ 0.93
MBD3-201ENST00000156825 OR52Z1P0C646 297 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 APOA5Q6Q788 366 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 ST7Q9NRC1 585 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 IMPACTQ9P2X3 320 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 IVLP07476 585 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 POLA2Q14181 598 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 ARHGEF16Q5VV41 709 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 FBXO11Q86XK2 927 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 OSBP2Q969R2 916 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 CCDC94Q9BW85 323 aaPredicted RBP20.87■□□□□ 0.93
MBD3-201ENST00000156825 NT5C3AQ9H0P0 336 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 DAPK3O43293 454 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 CDC25AP30304 524 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 NEO1Q92859 1461 aa20.87■□□□□ 0.93
MBD3-201ENST00000156825 SLC16A2P36021 539 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 MORC3Q14149 939 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 MYOCDQ8IZQ8 938 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 TTC14Q96N46 770 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 SUGCTQ9HAC7 445 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 PEX26Q7Z412 305 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 FMNL3Q8IVF7 1028 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 U2AF1L4Q8WU68 220 aaKnown RBP20.86■□□□□ 0.93
MBD3-201ENST00000156825 WDR70Q9NW82 654 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 FLOT1O75955 427 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 CMA1P23946 247 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 KRBA2Q6ZNG9 492 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 CEP57Q86XR8 500 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 PSMC4P43686 418 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 DIXDC1Q155Q3 683 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 LCORLQ8N3X6 602 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 PIGBQ92521 554 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 CCDC127Q96BQ5 260 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 AATKQ6ZMQ8 1374 aa20.86■□□□□ 0.93
MBD3-201ENST00000156825 PTPN12Q05209 780 aaKnown RBP20.85■□□□□ 0.93
MBD3-201ENST00000156825 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 KCTD1Q719H9 257 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 NLRP10Q86W26 655 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 UBL4BQ8N7F7 174 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 RNF169Q8NCN4 708 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 DDX25Q9UHL0 483 aaKnown RBP20.85■□□□□ 0.93
MBD3-201ENST00000156825 TTLL3Q9Y4R7 772 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 CSADQ9Y600 493 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 XKR9Q5GH70 373 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.85■□□□□ 0.93
MBD3-201ENST00000156825 USP6P35125 1406 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 SSH2Q76I76 1423 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 MLXIPQ9HAP2 919 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 SERPINB2P05120 415 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 XRCC5P13010 732 aaKnown RBP20.85■□□□□ 0.93
MBD3-201ENST00000156825 SMYD4Q8IYR2 804 aaPredicted RBP20.85■□□□□ 0.93
MBD3-201ENST00000156825 ANKRD13CQ8N6S4 541 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 SMC6Q96SB8 1091 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 MED23Q9ULK4 1368 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 RPS6KA1Q15418 735 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 NAP1L3Q99457 506 aaPredicted RBP20.85■□□□□ 0.93
MBD3-201ENST00000156825 ZMYND15Q9H091 742 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 PCDHA5Q9Y5H7 936 aa20.85■□□□□ 0.93
MBD3-201ENST00000156825 SAMD9Q5K651 1589 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.84■□□□□ 0.93
MBD3-201ENST00000156825 GDF11O95390 407 aa20.84■□□□□ 0.93
MBD3-201ENST00000156825 TUBB4BP68371 445 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms