RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 DAGLAQ9Y4D2 1042 aa9.41□□□□□ -0.9
VAMP3-201ENST00000054666 PARP3Q9Y6F1 533 aa9.41□□□□□ -0.9
VAMP3-201ENST00000054666 DYNC1I1O14576 645 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 SLFN14P0C7P3 912 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 TOP1P11387 765 aaKnown RBP9.4□□□□□ -0.9
VAMP3-201ENST00000054666 SKILP12757 684 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 UBASH3AP57075 661 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 TPD52L1Q16890 204 aaPredicted RBP9.4□□□□□ -0.9
VAMP3-201ENST00000054666 ARL6IP4Q66PJ3 421 aaKnown RBP9.4□□□□□ -0.9
VAMP3-201ENST00000054666 DPP8Q6V1X1 898 aaPredicted RBP9.4□□□□□ -0.9
VAMP3-201ENST00000054666 MYRIPQ8NFW9 859 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 SPZ1Q9BXG8 430 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 SEC63Q9UGP8 760 aaKnown RBP9.4□□□□□ -0.9
VAMP3-201ENST00000054666 QSER1Q2KHR3 1735 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 EP400Q96L91 3159 aa9.4□□□□□ -0.9
VAMP3-201ENST00000054666 PALM3A6NDB9 673 aaPredicted RBP9.4□□□□□ -0.91
VAMP3-201ENST00000054666 SRGNP10124 158 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 PICALMQ13492 652 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 MORC3Q14149 939 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF827Q17R98 1081 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 USP49Q70CQ1 688 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 FOXP4Q8IVH2 680 aaPredicted RBP9.4□□□□□ -0.91
VAMP3-201ENST00000054666 GRAMD1CQ8IYS0 662 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 IQUBQ8NA54 791 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 DAGLBQ8NCG7 672 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 EPSTI1Q96J88 318 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 C16orf45Q96MC5 204 aaPredicted RBP9.4□□□□□ -0.91
VAMP3-201ENST00000054666 BARHL2Q9NY43 387 aa9.4□□□□□ -0.91
VAMP3-201ENST00000054666 PLIN4Q96Q06 1357 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 MYH8P13535 1937 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 KLRF2D3W0D1 207 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 F8W031 263 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 PLSCR1O15162 318 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 APBA3O96018 575 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 ATP1A3P13637 1013 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 LONP1P36776 959 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 AFMP43652 599 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 SARSP49591 514 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 NAPAP54920 295 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 NOM1Q5C9Z4 860 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 CT47A1Q5JQC4 288 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 PROM2Q8N271 834 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 RRP36Q96EU6 259 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 CEP95Q96GE4 821 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 MASTLQ96GX5 879 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 TTF2Q9UNY4 1162 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 COL11A2P13942 1736 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 STXBP3O00186 592 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 WNT7AO00755 349 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 CDK11BP21127 795 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 CCZ1BP86790 482 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 CCZ1P86791 482 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 ARID5BQ14865 1188 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 SOGA3Q5TF21 947 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF772Q68DY9 489 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 COL23A1Q86Y22 540 aaPredicted RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 RASSF8Q8NHQ8 419 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 ENOX1Q8TC92 643 aaKnown RBP9.39□□□□□ -0.91
VAMP3-201ENST00000054666 AKT1S1Q96B36 256 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 NFE2L3Q9Y4A8 694 aa9.39□□□□□ -0.91
VAMP3-201ENST00000054666 A0A087X0B3 334 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 CYTH3O43739 400 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 HLA-DOAP06340 250 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 MMP10P09238 476 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 GOLGA8HP0CJ92 632 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 TNNT1P13805 278 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 BMP6P22004 513 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 ERCC5P28715 1186 aaPredicted RBP9.38□□□□□ -0.91
VAMP3-201ENST00000054666 GNA11P29992 359 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 KRT25Q7Z3Z0 450 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 HOMER1Q86YM7 354 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 CCDC112Q8NEF3 446 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 SPATA20Q8TB22 786 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 RASGRP4Q8TDF6 673 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 PAGE5Q96GU1 130 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 GSDMAQ96QA5 445 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 HSD3B7Q9H2F3 369 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 FANCLQ9NW38 375 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 SWAP70Q9UH65 585 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 SYNRGQ9UMZ2 1314 aa9.38□□□□□ -0.91
VAMP3-201ENST00000054666 hCG_1984214I3L0E3 225 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 LAD1O00515 517 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 VEGFAP15692 232 aaPredicted RBP9.37□□□□□ -0.91
VAMP3-201ENST00000054666 SMARCA1P28370 1054 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 SH3RF1Q7Z6J0 888 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF713Q8N859 430 aaPredicted RBP9.37□□□□□ -0.91
VAMP3-201ENST00000054666 ZNF622Q969S3 477 aaKnown RBP eCLIP9.37□□□□□ -0.91
VAMP3-201ENST00000054666 TEKT1Q969V4 418 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 C6orf50Q9HD87 102 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 PCDHA6Q9UN73 950 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 PCDHA8Q9Y5H6 950 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 MYO3BQ8WXR4 1341 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 STAT6P42226 847 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 DPYDQ12882 1025 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 DOK7Q18PE1 504 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 ASPRV1Q53RT3 343 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 PPP4R3BQ5MIZ7 849 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 TYW1BQ6NUM6 668 aa9.37□□□□□ -0.91
VAMP3-201ENST00000054666 USP17L2Q6R6M4 530 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms