RNA–Protein interactions for RNA: ENSMUST00000105409.7

Col18a1-203, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Col18a1, Length 4,791 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-203ENSMUST00000105409 Tsga10Q6NY15 697 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Nek5Q7TSC3 627 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Lrp2bpQ9D4C6 346 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ap1b1O35643 943 aaKnown RBP13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Bach1P97302 739 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 HelbQ6NVF4 1074 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Slc17a8Q8BFU8 601 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Plcd3Q8K2J0 785 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 McamQ8R2Y2 648 aaKnown RBP13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Zkscan5Q9Z1D8 819 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Nup153E9Q3G8 1462 aaKnown RBP13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 EmbP21995 330 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Armcx3Q8BHS6 379 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 QarsQ8BML9 775 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Rbm33Q9CXK9 1231 aaKnown RBP13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Serpinb12Q9D7P9 423 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Slit2Q9R1B9 1521 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Esr2O08537 530 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Mpp4Q6P7F1 635 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Kiaa0319lQ8K135 1048 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Usp11Q99K46 921 aa13.11□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Arap3Q8R5G7 1538 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Cplx4Q80WM3 160 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Tsnaxip1Q99P25 704 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 IcoslgQ9JHJ8 322 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Mkrn1Q9QXP6 481 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Rnf123Q5XPI3 1314 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Gm43638A0A0J9YU36 694 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Pde6aP27664 859 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Zdhhc9P59268 364 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ccdc114Q3UX62 658 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fkbp3Q62446 224 aaKnown RBP13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Psma7Q9Z2U0 248 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Slit1Q80TR4 1531 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 ChkbO55229 394 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Tex35Q14BK3 207 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Cnnm4Q69ZF7 771 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Krt77Q6IFZ6 572 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Apol10aQ8CCA5 318 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Kcnk13Q8R1P5 405 aa13.1□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Trappc10Q3TLI0 1259 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Tmed8Q3UHI4 326 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Tom1l2Q5SRX1 507 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ccdc57Q6PHN1 1016 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Rbm15bQ6PHZ5 887 aaKnown RBP13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ubn2Q80WC1 1314 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Spata31d1bE9QA57 1361 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Lcmt1A0A0U1RNF2 332 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 SlmapQ3URD3 845 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 RragaQ80X95 313 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Hps6Q8BLY7 805 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Srp68Q8BMA6 625 aaKnown RBP13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fam102bQ8BQS4 339 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fam114a1Q9D281 569 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Klhl40Q9D783 621 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Clic4Q9QYB1 253 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Gdf11Q9Z1W4 405 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Dnajc21E9Q8D0 531 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Cbfa2t2O70374 594 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Gm5169Q5M8P2 212 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 HhatQ8BMT9 499 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Rad51bO35719 350 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fam83bQ0VBM2 1012 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fam178bQ24JP3 464 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ints8Q80V86 995 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Fam228aQ8CDW1 299 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 BbxQ8VBW5 907 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Eaf2Q91ZD6 262 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ebag9Q9D0V7 213 aa13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Nop56Q9D6Z1 580 aaKnown RBP13.09□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Gucy1b3O54865 620 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Slc4a1P04919 929 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Rps6ka1P18653 724 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Ripply1Q2WG77 201 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Acot10Q32MW3 439 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 TchpQ3TVW5 497 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Vat1lQ80TB8 417 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Etf1Q8BWY3 437 aaKnown RBP13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Afg3l2Q8JZQ2 802 aaKnown RBP13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Nup58Q8R332 587 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 Pcdhb2Q91Y00 799 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 JmyQ9QXM1 983 aa13.08□□□□□ -0.31
Col18a1-203ENSMUST00000105409 MeiocA2AG06 965 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 VimP20152 466 aaKnown RBP13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 AsnsQ61024 561 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Acsl3Q9CZW4 720 aaKnown RBP13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Speer2E9Q9U2 264 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Ano9P86044 747 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Dok7Q18PE0 504 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Mtus1Q5HZI1 1210 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Acap3Q6NXL5 833 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Kiaa1328Q6NZK5 612 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Strip1Q8C079 837 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Iws1Q8C1D8 766 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Spats2Q8K1N4 545 aaKnown RBP13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Mcur1Q9CXD6 340 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Trpc3Q9QZC1 836 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Sclt1G5E861 688 aa13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Krt8P11679 490 aaKnown RBP13.08□□□□□ -0.32
Col18a1-203ENSMUST00000105409 Gsta4P24472 222 aa13.08□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms