RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ppp2r3aB2RXC8 1150 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tph1P17532 447 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gja8P28236 440 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Rnf216P58283 853 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Map4k1P70218 827 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pald1P70261 859 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Sp4Q62445 782 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Lca5Q80ST9 704 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pgrmc2Q80UU9 217 aaKnown RBP14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Znf784Q8BI69 297 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pus7lQ8CE46 702 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Bst2Q8R2Q8 172 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tdrd3Q91W18 743 aaKnown RBP14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Dnajc17Q91WT4 303 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Chmp5Q9D7S9 219 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ak2Q9WTP6 239 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Tll2Q9WVM6 1012 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Rnf123Q5XPI3 1314 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Myh8P13542 1937 aa14.29□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Ms4a4aA0A087WRT7 236 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Rbm8a2A0A0N4SUH6 174 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pitpnm1O35954 1243 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fzd1O70421 642 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Stat3P42227 770 aaKnown RBP14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pla2g6P97819 807 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Atp11aP98197 1187 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Cep126Q0VBV7 1103 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm1587Q3UT80 123 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Fam170aQ66LM6 333 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Spty2d1Q68FG3 682 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Usp50Q6P8X6 390 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Terb1Q8C0V1 768 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Iws1Q8C1D8 766 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Morc2bQ8C5W4 1022 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Rbm8aQ9CWZ3 174 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Pmfbp1Q9WVQ0 1022 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Nek4Q9Z1J2 792 aa14.28□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 RptorQ8K4Q0 1335 aa14.27□□□□□ -0.12
Ccdc28a-202ENSMUST00000080860 Gm15448F6PZL4 682 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Lipo1J3QME6 396 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 LdhbP16125 334 aaKnown RBP14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 OatP29758 439 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Cntnap5bQ0V8T8 1292 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Myo19Q5SV80 963 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Prpf40bQ80W14 870 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Nim1kQ8BHI9 436 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Fez1Q8K0X8 392 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Paf1Q8K2T8 535 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Lrrc56Q8K375 552 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Gtf3c5Q8R2T8 520 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Usp26Q99MX1 835 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Mxra8Q9DBV4 442 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Dnajb2Q9QYI5 324 aa14.27□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Copb2O55029 905 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 MyocO70624 490 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Il13ra2O88786 383 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Usp5P56399 858 aaKnown RBP14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Zfp957Q3UT76 567 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Zfp90Q61967 636 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Lrch3Q8BVU0 778 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Atad2Q8CDM1 1040 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Dlk2Q8K1E3 382 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Gpr108Q91WD0 569 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 PdhbQ9D051 359 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Htra3Q9D236 459 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Mlh1Q9JK91 760 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Hmg20bQ9Z104 317 aa14.26□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Nlrc5C3VPR6 1915 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Kcnb2A6H8H5 907 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ms4a2P20490 235 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ddit3P35639 168 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Nploc4P60670 608 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Miga1Q4QQM5 600 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Vmn1r209Q5NC97 312 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Zdhhc15Q8BGJ0 337 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Dpp9Q8BVG4 862 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Zhx2Q8C0C0 836 aaKnown RBP14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Adgra1Q8C4G9 578 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 RnpepQ8VCT3 650 aaKnown RBP14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Atp5c1Q91VR2 298 aaKnown RBP14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ivns1abpQ920Q8 642 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Dbr1Q923B1 550 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Inpp4aQ9EPW0 939 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Tnnt3Q9QZ47 272 aa14.25□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Prr16A3KMN5 304 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Hmgcs2P54869 508 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Btbd1P58544 488 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Sox10Q04888 466 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Kctd1Q5M956 257 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Crhr2Q60748 411 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Ptger2Q62053 362 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Haus6Q6NV99 933 aaKnown RBP14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 U2af1l4Q8BGJ9 220 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Hps6Q8BLY7 805 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Armc6Q8BNU0 468 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Kiaa1524Q8BWY9 907 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Prkag2Q91WG5 566 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 4921524L21RikQ9D5T2 438 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Sil1Q9EPK6 465 aa14.24□□□□□ -0.13
Ccdc28a-202ENSMUST00000080860 Lama3Q61789 3330 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms