RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Ptpn14Q62130 1189 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ctdspl2Q8BG15 465 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Usp27Q8CEG8 438 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Pcdha12Q91Y18 950 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Srgap2Q91Z67 1071 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Rdm1Q9CQK3 281 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dph5Q9CWQ0 281 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 3830403N18RikQ9D6C3 208 aa7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Xab2Q9DCD2 855 aaKnown RBP7.8□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Skor2A7M7C7 1008 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dnm2P39054 870 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ddb1Q3U1J4 1140 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Cyp7a1Q64505 503 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Rbm26Q6NZN0 1012 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Depdc1bQ8BH88 529 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Kirrel3Q8BR86 778 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 NemfQ8CCP0 1064 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Champ1Q8K327 802 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 GptQ8QZR5 496 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Asic2Q925H0 512 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dph6Q9CQ28 267 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 LratQ9JI60 231 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Snx1Q9WV80 522 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Setd1bQ8CFT2 1985 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Klhl34A2AI76 644 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Bfsp1A2AMT1 669 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Izumo3A6PWV3 263 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ugt1a5B2RT14 529 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Pus7B7ZNL8 666 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nck2O55033 380 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 S100bP50114 92 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Birc2Q62210 612 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Myo6Q64331 1265 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Unc5clQ6R653 518 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dnajc3Q91YW3 504 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Sh2b1Q91ZM2 756 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Fam213aQ9CYH2 218 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm32742A0A1B0GT42 1604 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Apol7aB2RT54 418 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Art2bO35975 289 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Slc4a4O88343 1079 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 IkbkgO88522 412 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 DesP31001 469 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Timm10P62073 90 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Hnrnph2P70333 449 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Atp8a1P70704 1164 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ano9P86044 747 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Spg7Q3ULF4 781 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ppp1r12bQ8BG95 976 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Trpa1Q8BLA8 1125 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Tcp11l2Q8K1H7 517 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Hexim1Q8R409 356 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Hps3Q91VB4 1002 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ttc5Q99LG4 440 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dctpp1Q9QY93 170 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Usp19Q3UJD6 1360 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ttll7A4Q9F0 912 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm28042B7ZCM9 1014 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm6121L7MUF1 212 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 HdxQ14B70 692 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Wdr70Q3TWF6 657 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Prr18Q6PAN7 307 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nxf7Q80SZ6 620 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Fam160b2Q80YR2 744 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Lsm14bQ8CGC4 385 aaKnown RBP7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nde1Q9CZA6 344 aa7.79□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm5580A0A0N4SVP8 411 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Klhl41A2AUC9 606 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm6588E9Q3K0 461 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 HpdP49429 393 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Zc3h12cQ5DTV4 884 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Adam1aQ60813 791 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Tpp2Q64514 1262 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Copb1Q9JIF7 953 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Cep152A2AUM9 1736 aaKnown RBP7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Pdzrn4E9PUZ9 1014 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Kcnk16G5E845 292 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Atp2a2O55143 1044 aaKnown RBP7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gja8P28236 440 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nub1P54729 614 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Senp1P59110 640 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ctnna3Q65CL1 895 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Daam2Q80U19 1115 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nlrp4aQ8BU40 982 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Q8BWG4 1187 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Cdan1Q8CC12 1239 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Rabep2Q91WG2 554 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Tldc2A2ACG1 198 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm5936A2BG95 728 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Dennd3A2RT67 1274 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Gm5640A3KG49 728 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Nap1l2P51860 460 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ect2Q07139 913 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Igflr1Q3U4N7 345 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Tab3Q571K4 716 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Ppp1r1bQ60829 194 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Tekt3Q6X6Z7 490 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Clasp2Q8BRT1 1286 aaKnown RBP7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Zfp317Q8C0Q5 607 aa7.78□□□□□ -1.16
Smc1a-201ENSMUST00000045312 Lrrd1Q8C0R9 853 aa7.78□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 65.7 ms