RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Lonp1Q8CGK3 949 aaKnown RBP10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Copb1Q9JIF7 953 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Polr2fP61219 127 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Serpinb13Q8CDC0 389 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dnm2P39054 870 aaKnown RBP10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Card10P58660 1021 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rps8P62242 208 aaKnown RBP10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Traf5P70191 558 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Lig3P97386 1015 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dhx37Q6NZL1 1150 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Cfap36Q8C6E0 343 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dnajb7Q9QYI8 312 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ppp2r3dQ9Z176 491 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Prkg1P0C605 671 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Tas2r124Q7M718 309 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 PaoxQ8C0L6 504 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Zfp113Q8C689 439 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Mfap3Q922T2 349 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Zcchc8Q9CYA6 709 aaKnown RBP10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Gtf2iQ9ESZ8 998 aaKnown RBP10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Nlrp5Q9R1M5 1163 aa10.81□□□□□ -0.68
Syne1-201ENSMUST00000041639 Pagr1bF6V0H0 108 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Nr1i2O54915 431 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ano9P86044 747 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Pagr1aQ99L02 253 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fdx1P46656 188 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Prpf38aQ4FK66 312 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Cdc23Q8BGZ4 597 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rcn2Q8BP92 320 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 SarnpQ9D1J3 210 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Mast1Q9R1L5 1570 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 PzpQ61838 1495 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 CaluO35887 315 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ftl1P29391 183 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dok7Q18PE0 504 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fhdc1Q3ULZ2 1149 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Trim80Q3V061 624 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Zbtb40Q6PCS8 1258 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Tmem87aQ8BXN9 555 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Taco1Q8K0Z7 294 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Gtf3c5Q8R2T8 520 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rbm42Q91V81 474 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Osbpl1aQ91XL9 950 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Emilin1Q99K41 1017 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rsph3bQ9DA80 389 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Art2bO35975 289 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Surf6P70279 355 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 GlyctkQ8QZY2 523 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fam133bQ9CVI2 245 aaKnown RBP10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fam217aQ9D9W6 419 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 PcQ05920 1178 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Stxbp3Q60770 592 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Atp2a3Q64518 1038 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 Cd209bQ8CJ91 325 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 DexiQ9WUQ7 95 aa10.8□□□□□ -0.68
Syne1-201ENSMUST00000041639 H2afzP0C0S6 128 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fen1P39749 378 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 GssP51855 474 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Fam207aP58468 219 aaKnown RBP10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 H2afvQ3THW5 128 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 DbnlQ62418 436 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rab11fip4Q8BQP8 635 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Clasp2Q8BRT1 1286 aaKnown RBP10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Atp1a1Q8VDN2 1023 aaKnown RBP10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 BlvraQ9CY64 295 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Nup62clA2AG10 272 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Tuft1O08970 390 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Zfp91Q62511 572 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Zbtb7bQ64321 544 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Swap70Q6A028 585 aaKnown RBP10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Wdr44Q6NVE8 915 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Galnt17Q7TT15 598 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Pja2Q80U04 707 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 GopcQ8BH60 463 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ankk1Q8BZ25 745 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dnm3Q8BZ98 863 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Card14Q99KF0 999 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Unc13aQ4KUS2 1712 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Xrcc5P27641 732 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Pcif1P59114 706 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dzip3Q7TPV2 1204 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ccdc169Q8BXX9 214 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Rps6ka5Q8C050 863 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Cbx6Q9DBY5 414 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Npc1l1Q6T3U4 1333 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Apol11aE9PZG0 334 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 C87499Q3UX49 493 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Cdc26Q99JP4 85 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Med23Q80YQ2 1367 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Esr2O08537 530 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Gja8P28236 440 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 IvlP48997 467 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Kctd16Q5DTY9 427 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Ccdc125Q5U465 500 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Dpp8Q80YA7 892 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Mei4Q8BRM6 389 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Sept11Q8C1B7 431 aaKnown RBP10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Appl2Q8K3G9 662 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 Aox2Q5SGK3 1345 aa10.79□□□□□ -0.68
Syne1-201ENSMUST00000041639 A0A1Y7VML8 143 aa10.78□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms