RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 Nfatc2ipO09130 412 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Ess2O70279 479 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Spag5Q7TME2 1165 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Rasal3Q8C2K5 1041 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Znf287Q9EQB9 759 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 ChmQ9QXG2 665 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Nr2e3Q9QXZ7 395 aa28■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Zscan18E9PUD6 809 aa27.99■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 GpiP06745 558 aaKnown RBP27.99■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 NefhP19246 1090 aa27.99■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Ccdc102aQ3TMW1 549 aa27.99■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Tlr8P58682 1032 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 EgfrQ01279 1210 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Ovgp1Q62010 721 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Apol10aQ8CCA5 318 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Cdk8Q8R3L8 464 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Mmtag2Q99LX5 260 aaKnown RBP27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Chd5A2A8L1 1946 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Herc3A6H6S0 1050 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Usp5P56399 858 aaKnown RBP27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Eya3P97480 510 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 VrtnQ3SYK4 740 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Ccdc122Q8BVN0 290 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Ccdc38Q8CDN8 563 aa27.98■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Scgb2b18A0A087WPA9 112 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Nsrp1Q5NCR9 542 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Cnga2Q62398 664 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Epha10Q8BYG9 1007 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Gtf3c5Q8R2T8 520 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Rbm19Q8R3C6 952 aaKnown RBP27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 St5Q924W7 1134 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 A0A1W2P6Q8 802 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Gm9048A0A1W2P7H4 802 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 A0A1W2P7Z8 802 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Gm9046A0A1W2P855 802 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 MthfslL7N466 203 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 LdhaP06151 332 aaKnown RBP27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Pola2P33611 600 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Adam6bQ6IMH7 756 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Smarca1Q6PGB8 1046 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 NelfbQ8C4Y3 580 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Fbxo18Q8K2I9 1042 aa27.97■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Dnai2A2AC93 623 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Gng11P61953 73 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Kcnb1Q03717 857 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Uri1Q3TLD5 531 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Tbc1d2bQ3U0J8 965 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Mdh1bQ5F204 500 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Rhpn1Q61085 643 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Vps18Q8R307 973 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Lamb1P02469 1786 aa27.96■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Fam186bD3Z420 943 aa27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Nr1i2O54915 431 aa27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Rc3h1Q4VGL6 1130 aaKnown RBP27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Lca5Q80ST9 704 aa27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 BaatQ91X34 420 aa27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Mfap3lQ9D3X9 409 aa27.95■■■□□ 2.07
Cldnd1-201ENSMUST00000023426 Arid4aF8VPQ2 1261 aaKnown RBP27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Atp6v0a2P15920 856 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Gcnt1Q09324 428 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Gucy2cQ3UWA6 1072 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Galnt17Q7TT15 598 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ppp2r5dQ91V89 594 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Hps4Q99KG7 671 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Alpk1Q9CXB8 1231 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Tfap4Q9JIZ5 338 aa27.95■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Adam7O35227 789 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 H2afxP27661 143 aaKnown RBP27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Necab1Q8BG18 352 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Eps8l1Q8R5F8 716 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Slc44a4Q91VA1 707 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Txndc5Q91W90 417 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Mtfr1lQ9CWE0 289 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Gna11P21278 359 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Lamb3Q61087 1168 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ces3aQ63880 571 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Trak2Q6P9N8 913 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Kctd3Q8BFX3 815 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 WdpcpQ8C456 722 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 OplahQ8K010 1288 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ces3bQ8VCU1 571 aa27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Uso1Q9Z1Z0 959 aaKnown RBP27.94■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Krt78E9Q0F0 1068 aa27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Vmn2r71L7N2D8 855 aa27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Gpbp1Q6NXH3 473 aaKnown RBP27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Dlg1Q811D0 905 aaKnown RBP27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Phldb2Q8K1N2 1249 aa27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Copb1Q9JIF7 953 aa27.93■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ankrd13dQ6PD24 605 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Zdhhc14Q8BQQ1 489 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 MypopQ8R4U1 393 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Mss51Q9D5Z5 446 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Ccdc88aQ5SNZ0 1873 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Vmn2r68L7N2B3 851 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Alppl2P24823 529 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 MyrflQ3UN70 904 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Grm4Q68EF4 912 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Fbxo2Q80UW2 297 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Maats1Q8BRC6 783 aa27.92■■■□□ 2.06
Cldnd1-201ENSMUST00000023426 Tango6Q8C3S2 1079 aa27.92■■■□□ 2.06
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms