RNA–Protein interactions for RNA: ENSMUST00000021278.13

Ctc1-201, Transcript of CST complex subunit CTC1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ctc1, Length 4,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-201ENSMUST00000021278 CyldQ80TQ2 952 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 TatQ8QZR1 454 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Golph3lQ8R088 285 aaKnown RBP10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Znf445Q8R2V3 986 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 AdarQ99MU3 1178 aaKnown RBP10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Efcab2Q9CQ46 164 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nde1Q9CZA6 344 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ndel1Q9ERR1 345 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Chil3O35744 398 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Sptlc2P97363 560 aaKnown RBP10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc174Q3U155 467 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Dzip1lQ499E4 774 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc157Q5SPX1 718 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Zbtb17Q60821 794 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Klhl7Q8BUL5 586 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Gimap6Q8K349 305 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Smap1Q91VZ6 440 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Psma8Q9CWH6 250 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc89Q9DA73 370 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Maml3D4QGC2 1135 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ube3aO08759 870 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Dapk3O54784 448 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Atp2a2O55143 1044 aaKnown RBP10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 LtkP08923 888 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Klra9Q2TJJ8 266 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 HelqQ2VPA6 1069 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Lrch2Q3UMG5 773 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cyp4f39Q8BGU0 532 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ints4Q8CIM8 964 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 OscarQ8VBT3 265 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tubb6Q922F4 447 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ranbp17Q99NF8 1088 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Mcur1Q9CXD6 340 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Sil1Q9EPK6 465 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Klra10Q9R1G6 266 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 DccP70211 1447 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rad50P70388 1312 aa10.24□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Me1P06801 572 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 OatP29758 439 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Csrnp1P59054 583 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ddr1Q03146 911 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 LyarQ08288 388 aaKnown RBP10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ift20Q61025 132 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Krt12Q64291 487 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Luc7l2Q7TNC4 392 aaKnown RBP10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Maip1Q8BHE8 291 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tsen34Q8BMZ5 316 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Zfp202Q8C879 641 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rufy2Q8R4C2 606 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Mrpl44Q9CY73 333 aaKnown RBP10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Mphosph6Q9D1Q1 161 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cdc45Q9Z1X9 566 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nphp3Q7TNH6 1325 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Klhl34A2AI76 644 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tcp11Q01755 566 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Satb1Q60611 764 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 NostrinQ6WKZ7 506 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tbc1d5Q80XQ2 815 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc150Q8CDI7 1110 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Acot9Q9R0X4 439 aaKnown RBP10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 PtpruB1AUH1 1446 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 A630010A05RikA9C473 232 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Grik3B1AS29 919 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Stk10O55098 966 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Phc1Q64028 1012 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Krt39Q6IFX4 482 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Dnajc6Q80TZ3 938 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Serpinb13Q8CDC0 389 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tbc1d23Q8K0F1 684 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Caap1Q8VDY9 356 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Vps16Q920Q4 839 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 NsmfQ99NF2 532 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Tmed10Q9D1D4 219 aaKnown RBP10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Q9D1Z2 194 aa10.23□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Plekhg1F6S200 1446 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rbm8a2A0A0N4SUH6 174 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ttc30a2A2AKQ8 664 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Gm5624F6ZZG8 207 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Nol8Q3UHX0 1147 aaKnown RBP10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ccdc82Q6PG04 518 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Eif3hQ91WK2 352 aaKnown RBP10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rrp1bQ91YK2 724 aaKnown RBP10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cdca7lQ922M5 438 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ttc30a1Q99J38 664 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Trpd52l3Q9CQ14 231 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rbm8aQ9CWZ3 174 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Ttc30bQ9CY00 664 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 UvssaQ9D479 717 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rab27aQ9ERI2 221 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 GsdmeQ9Z2D3 512 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Zfp142G5E869 1843 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Znf521Q6KAS7 1311 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Sipa1l2Q80TE4 1722 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Lrrn4P59383 733 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Cracr2aQ3UP38 310 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Snx25Q3ZT31 840 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Rnf220Q6PDX6 566 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Idi2Q8BFZ6 227 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 Dennd6aQ8BH65 605 aa10.22□□□□□ -0.77
Ctc1-201ENSMUST00000021278 AopepQ8BXQ6 817 aa10.22□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms