RNA–Protein interactions for RNA: ENSMUST00000011877.12

Sptbn1-202, Transcript of Spectrin beta chain, non-erythrocytic 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sptbn1, Length 8,238 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn1-202ENSMUST00000011877 Ccdc78D3Z5T1 437 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 PrimpolQ6P1E7 537 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Rabgap1A2AWA9 1064 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Nfx1B1AY10 1114 aaKnown RBP10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tyro3P55144 880 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Myo1fP70248 1099 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Zscan2Q07230 614 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ckap2Q3V1H1 664 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 FanclQ9CR14 375 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 NapgQ9CWZ7 312 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Prss51A0A286YDY8 319 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm29094F6Q785 221 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ankrd6Q69ZU8 712 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Utp14bQ6EJB6 756 aaKnown RBP10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Znf532Q6NXK2 1036 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Fra10ac1Q8BP78 315 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Rd3Q8BRE0 195 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ndc80Q9D0F1 642 aaKnown RBP10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Frmpd4A2AFR3 1320 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Syndig1A2ANU3 258 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Btn2a2A4QPC6 514 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Nudt18Q3U2V3 323 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Snx19Q6P4T1 997 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 CntrobQ8CB62 887 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gtf2a1Q99PM3 378 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Plekha5E9Q6H8 1269 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 NmiO35309 314 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Kpna2P52293 529 aaKnown RBP10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Slc39a6Q8C145 765 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ccdc92Q8VDN4 314 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 HnrnpcQ9Z204 313 aaKnown RBP10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Krt27Q9Z320 448 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm2237E9Q501 211 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm3591K7N6X2 186 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tuft1O08970 390 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm3414Q3TNU4 584 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tubb2aQ7TMM9 445 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Abcg3Q99P81 650 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tubb2bQ9CWF2 445 aa10.68□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Fam81bA0A140LI28 432 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Rps6ka1P18653 724 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Stx19Q8R1Q0 292 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Smc6Q924W5 1097 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tex9Q9D845 387 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Kcng1A2BDX4 514 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ccdc121E9Q6D3 323 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm6583E9Q8Z1 469 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Timm10P62073 90 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 PhexP70669 749 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Pank2Q3U4S0 443 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Jarid2Q62315 1234 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Sv2cQ69ZS6 727 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ccdc68Q8BVC4 333 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Nup58Q8R332 587 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Lztfl1Q9JHQ5 299 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Nkx1-2P42580 305 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Caprin1Q60865 707 aaKnown RBP10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Trim27Q62158 513 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Tmem132dQ76HP3 1097 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Serpinb13Q8CDC0 389 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Cabcoco1Q8CDT7 208 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Plekha4Q8VC98 588 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Kcnh3Q9WVJ0 1095 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Akap17bA2A3V1 959 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Nlrp9aQ66X03 949 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Trim17Q7TPM3 477 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 MtbpQ8BJS8 894 aaKnown RBP10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Slc12a8Q8VI23 705 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 BaatQ91X34 420 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Usp35M0QWN7 1009 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Psmb7P70195 277 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Dars2Q8BIP0 653 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Snx30Q8CE50 437 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Eif3cQ8R1B4 911 aaKnown RBP10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Coa7Q921H9 231 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Rnaseh2aQ9CWY8 301 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Ebag9Q9D0V7 213 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Polr2dQ9D7M8 142 aaKnown RBP10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Supt3B0QZW4 406 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Micall2Q3TN34 1009 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 HscbQ8K3A0 234 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Timm44O35857 452 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Prl3d1P18121 224 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Zkscan4Q5SZT6 480 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Kcna6Q61923 529 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Myl10Q62082 202 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 LdhdQ7TNG8 484 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Smc5Q8CG46 1101 aaKnown RBP10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Rbm41Q8JZV4 413 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Zcchc18Q8VD24 393 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Kif2cQ922S8 721 aa10.67□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Lsp1P19973 330 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Hspa8P63017 646 aaKnown RBP10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Setd3Q91WC0 594 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Mcf2A2AEU1 1111 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm5624F6ZZG8 207 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Xrcc5P27641 732 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Q3KNL4 93 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Gm10392Q3V3I3 114 aa10.66□□□□□ -0.7
Sptbn1-202ENSMUST00000011877 Q80ZQ3 298 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 25.9 ms