RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Nkx2-5P42582 318 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Vsnl1P62761 191 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Aak1Q3UHJ0 959 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Arglu1Q3UL36 271 aaKnown RBP18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Smc1bQ920F6 1248 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Mfap3Q922T2 349 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Sgpp1Q9JI99 430 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Itga2bQ9QUM0 1033 aa18.54■□□□□ 0.56
Shh-201ENSMUST00000002708 Gm5580A0A0N4SVP8 411 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Gucy1a2F8VQK3 730 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 MarcksP26645 309 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Fchsd1Q6PFY1 688 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Cdc23Q8BGZ4 597 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Hgh1Q8C3I8 393 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 RadxQ8C779 850 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Gimap7Q8R379 293 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Hexim1Q8R409 356 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Uba5Q8VE47 403 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Golgb1E9PVZ8 3238 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Ecm29Q6PDI5 1840 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Pnpla6Q3TRM4 1355 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Gm21969J3QJZ1 289 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Ftl1P29391 183 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Znhit6Q3UFB2 460 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Mars2Q499X9 586 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 RragbQ6NTA4 374 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Ppfibp1Q8C8U0 969 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Rrp1bQ91YK2 724 aaKnown RBP18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Dynll2Q9D0M5 89 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Gpaa1Q9WTK3 621 aa18.53■□□□□ 0.56
Shh-201ENSMUST00000002708 Adam6bQ6IMH7 756 aa18.52■□□□□ 0.56
Shh-201ENSMUST00000002708 Ano2Q8CFW1 1002 aa18.52■□□□□ 0.56
Shh-201ENSMUST00000002708 Pcdha12Q91Y18 950 aa18.52■□□□□ 0.56
Shh-201ENSMUST00000002708 Map7d2A2AG50 781 aa18.52■□□□□ 0.55
Shh-201ENSMUST00000002708 Plekha7Q3UIL6 1118 aaKnown RBP18.52■□□□□ 0.55
Shh-201ENSMUST00000002708 Tekt3Q6X6Z7 490 aa18.52■□□□□ 0.55
Shh-201ENSMUST00000002708 Lrrc1Q80VQ1 524 aa18.52■□□□□ 0.55
Shh-201ENSMUST00000002708 Pla2g12bQ99P27 195 aa18.52■□□□□ 0.55
Shh-201ENSMUST00000002708 Cyp26c1B2RXA7 518 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Ptpn12P35831 775 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Setdb2Q8C267 713 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Sash3Q8K352 380 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Myo1hQ9D6A1 958 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Cyb5rlB1AS42 316 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Slurp2P0DP59 97 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Mtfr1lQ9CWE0 289 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 Ltn1Q6A009 1767 aa18.51■□□□□ 0.55
Shh-201ENSMUST00000002708 4932429P05RikA2ADI4 785 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 DSCC1Q14AI0 399 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Olfr121Q5CZY0 321 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Lrrc15Q80X72 579 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Srgap2Q91Z67 1071 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Tmem39aQ9CYC3 486 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Klhl10Q9D5V2 608 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Mrvi1Q9WUX5 899 aaKnown RBP18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Stag2O35638 1231 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Tmtc2Q56A06 836 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Jakmip3Q5DTN8 844 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Ces3aQ63880 571 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Ces3bQ8VCU1 571 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Golga5Q9QYE6 729 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Col20a1Q923P0 1320 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Rexo5D3YW29 759 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Cdh15P33146 784 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Arid3aQ62431 601 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Adck2Q6NSR3 617 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Epha10Q8BYG9 1007 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Ndufv1Q91YT0 464 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 Fam217aQ9D9W6 419 aa18.5■□□□□ 0.55
Shh-201ENSMUST00000002708 CluhQ5SW19 1315 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Palm3A2TJV2 734 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Pfkfb3A7UAK5 555 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Gm28042B7ZCM9 1014 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Api5O35841 504 aaKnown RBP18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Tmem232Q5K6N0 675 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Smarca1Q6PGB8 1046 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 DlatQ8BMF4 642 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Spice1Q8C804 860 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Myl6bQ8CI43 207 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Meis3P97368 378 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Mdh1bQ5F204 500 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 LarsQ8BMJ2 1178 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Q8C1R3 189 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Rassf4Q8CB96 322 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Kiaa0319lQ8K135 1048 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Trim29Q8R2Q0 587 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Tube1Q9D6T1 475 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Tpcn1Q9EQJ0 817 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 AmfrQ9R049 643 aa18.49■□□□□ 0.55
Shh-201ENSMUST00000002708 Ppef2O35385 757 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Tlr8P58682 1032 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Rbm5Q91YE7 815 aaKnown RBP18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Egfl6Q9JJZ5 550 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Epb41l3Q9WV92 929 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Gcom1E9PZ54 550 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Tpp1O89023 562 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 MyzapQ3UIJ9 466 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Calml3Q9D6P8 149 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 Myh8P13542 1937 aa18.48■□□□□ 0.55
Shh-201ENSMUST00000002708 NfixP70257 488 aa18.47■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms