RNA–Protein interactions for RNA: snR61

snR61, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR61, Length 90 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR61	snR61	MTC4	P38335	694 aa	Known RBP	0.25	□□□□□ -2.37
snR61	snR61	RRP3	P38712	501 aa	Known RBP	0.25	□□□□□ -2.37
snR61	snR61	CKB2	P38930	258 aa		0.25	□□□□□ -2.37
snR61	snR61	ARB1	P40024	610 aa	Known RBP	0.25	□□□□□ -2.37
snR61	snR61	SNG1	P46950	547 aa		0.25	□□□□□ -2.37
snR61	snR61	SHY1	P53266	389 aa		0.25	□□□□□ -2.37
snR61	snR61	WSC2	P53832	503 aa		0.25	□□□□□ -2.37
snR61	snR61	RBA50	Q04418	439 aa		0.25	□□□□□ -2.37
snR61	snR61	IES4	Q08561	116 aa		0.25	□□□□□ -2.37
snR61	snR61	HNT3	Q08702	217 aa		0.25	□□□□□ -2.37
snR61	snR61	YOL098C	Q12496	1037 aa		0.25	□□□□□ -2.37
snR61	snR61	VPS5	Q92331	675 aa		0.25	□□□□□ -2.37
snR61	snR61	APM4	Q99186	491 aa		0.25	□□□□□ -2.37
snR61	snR61	ADH2	P00331	348 aa	Known RBP	0.24	□□□□□ -2.37
snR61	snR61	PAD1	P33751	242 aa	Known RBP RIP-Chip data	0.24	□□□□□ -2.37	not detected
snR61	snR61	RCK2	P38623	610 aa		0.24	□□□□□ -2.37
snR61	snR61	EMP65	P40085	556 aa		0.24	□□□□□ -2.37
snR61	snR61	RGI2	P40188	164 aa		0.24	□□□□□ -2.37
snR61	snR61	YJR096W	P47137	282 aa		0.24	□□□□□ -2.37
snR61	snR61	YGL081W	P53156	320 aa		0.24	□□□□□ -2.37
snR61	snR61	MOT3	P54785	490 aa	Known RBP	0.24	□□□□□ -2.37
snR61	snR61	MAK10	Q02197	733 aa		0.24	□□□□□ -2.37
snR61	snR61	NUP100	Q02629	959 aa		0.24	□□□□□ -2.37
snR61	snR61	FMP45	Q07651	309 aa		0.24	□□□□□ -2.37
snR61	snR61	RPL20A	P0CX23	172 aa	Known RBP	0.23	□□□□□ -2.37
snR61	snR61	RPL20B	P0CX24	172 aa	Predicted RBP	0.23	□□□□□ -2.37
snR61	snR61	RPB8	P20436	146 aa		0.23	□□□□□ -2.37
snR61	snR61	PDE1	P22434	369 aa		0.23	□□□□□ -2.37
snR61	snR61	RER1	P25560	188 aa		0.23	□□□□□ -2.37
snR61	snR61	PTR2	P32901	601 aa		0.23	□□□□□ -2.37
snR61	snR61	YBL059W	P34224	193 aa		0.23	□□□□□ -2.37
snR61	snR61	SPC34	P36131	295 aa		0.23	□□□□□ -2.37
snR61	snR61	STV1	P37296	890 aa		0.23	□□□□□ -2.37
snR61	snR61	MNT2	P53059	558 aa		0.23	□□□□□ -2.37
snR61	snR61	PTA1	Q01329	785 aa	Predicted RBP	0.23	□□□□□ -2.37
snR61	snR61	YDR109C	Q04585	715 aa		0.23	□□□□□ -2.37
snR61	snR61	NSE3	Q05541	303 aa		0.23	□□□□□ -2.37
snR61	snR61	YPR091C	Q06833	770 aa		0.23	□□□□□ -2.37
snR61	snR61	YDL218W	Q07629	317 aa		0.23	□□□□□ -2.37
snR61	snR61	PRM7	Q12459	698 aa		0.23	□□□□□ -2.37
snR61	snR61	CHO1	P08456	276 aa		0.22	□□□□□ -2.37
snR61	snR61	STI1	P15705	589 aa	Known RBP RIP-Chip data	0.22	□□□□□ -2.37	not detected
snR61	snR61	ACH1	P32316	526 aa		0.22	□□□□□ -2.37
snR61	snR61	RFC1	P38630	861 aa	Known RBP	0.22	□□□□□ -2.37
snR61	snR61	FUN12	P39730	1002 aa	Known RBP	0.22	□□□□□ -2.37
snR61	snR61	PEA2	P40091	420 aa		0.22	□□□□□ -2.37
snR61	snR61	MGS1	P40151	587 aa		0.22	□□□□□ -2.37
snR61	snR61	MSO1	P53604	210 aa	Known RBP	0.22	□□□□□ -2.37
snR61	snR61	ARK1	P53974	638 aa		0.22	□□□□□ -2.37
snR61	snR61	PFA5	Q03289	374 aa		0.22	□□□□□ -2.37
snR61	snR61	YOR378W	Q08902	515 aa		0.22	□□□□□ -2.37
snR61	snR61	YBR255C-A	Q3E776	120 aa		0.22	□□□□□ -2.37
snR61	snR61	PRB1	P09232	635 aa		0.21	□□□□□ -2.38
snR61	snR61	ATP12	P22135	325 aa		0.21	□□□□□ -2.38
snR61	snR61	RVS161	P25343	265 aa	Known RBP	0.21	□□□□□ -2.38
snR61	snR61	FUN19	P28003	413 aa	Predicted RBP	0.21	□□□□□ -2.38
snR61	snR61	ELP3	Q02908	557 aa	Known RBP	0.21	□□□□□ -2.38
snR61	snR61	YMR027W	Q04371	470 aa		0.21	□□□□□ -2.38
snR61	snR61	CIA1	Q05583	330 aa		0.21	□□□□□ -2.38
snR61	snR61	HOS1	Q12214	470 aa		0.21	□□□□□ -2.38
snR61	snR61	CCH1	P50077	2039 aa		0.21	□□□□□ -2.38
snR61	snR61	SAL1	D6W196	494 aa		0.2	□□□□□ -2.38
snR61	snR61	SUP35	P05453	685 aa	Known RBP	0.2	□□□□□ -2.38
snR61	snR61	TKL1	P23254	680 aa	Known RBP	0.2	□□□□□ -2.38
snR61	snR61	PRP19	P32523	503 aa	Known RBP	0.2	□□□□□ -2.38
snR61	snR61	TUL1	P36096	758 aa		0.2	□□□□□ -2.38
snR61	snR61	IRC5	P43610	853 aa		0.2	□□□□□ -2.38
snR61	snR61	CDC45	Q08032	650 aa		0.2	□□□□□ -2.38
snR61	snR61	ERV2	Q12284	196 aa		0.2	□□□□□ -2.38
snR61	snR61	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	0.2	□□□□□ -2.38	not detected
snR61	snR61	PCT1	P13259	424 aa		0.19	□□□□□ -2.38
snR61	snR61	MRC1	P25588	1096 aa		0.19	□□□□□ -2.38
snR61	snR61	PAH1	P32567	862 aa		0.19	□□□□□ -2.38
snR61	snR61	SAC6	P32599	642 aa	Known RBP	0.19	□□□□□ -2.38
snR61	snR61	PHD1	P36093	366 aa		0.19	□□□□□ -2.38
snR61	snR61	SRP68	P38687	599 aa	Known RBP	0.19	□□□□□ -2.38
snR61	snR61	YGR079W	P53249	370 aa		0.19	□□□□□ -2.38
snR61	snR61	YNL193W	P53870	558 aa		0.19	□□□□□ -2.38
snR61	snR61	ADE16	P54113	591 aa	Known RBP	0.19	□□□□□ -2.38
snR61	snR61	MSS11	Q03825	758 aa		0.19	□□□□□ -2.38
snR61	snR61	MRPL35	Q06678	367 aa		0.19	□□□□□ -2.38
snR61	snR61	AAD4	Q07747	329 aa		0.19	□□□□□ -2.38
snR61	snR61	NTG2	Q08214	380 aa		0.19	□□□□□ -2.38
snR61	snR61	PET309	P32522	965 aa	Predicted RBP	0.18	□□□□□ -2.38
snR61	snR61	ADE17	P38009	592 aa	Known RBP	0.18	□□□□□ -2.38
snR61	snR61	VFA1	P40080	203 aa		0.18	□□□□□ -2.38
snR61	snR61	MSY1	P48527	492 aa		0.18	□□□□□ -2.38
snR61	snR61	YNR071C	P53757	342 aa		0.18	□□□□□ -2.38
snR61	snR61	TRS31	Q03337	283 aa		0.18	□□□□□ -2.38
snR61	snR61	PHO8	P11491	566 aa		0.17	□□□□□ -2.38
snR61	snR61	HSP26	P15992	214 aa	Known RBP RIP-Chip data	0.17	□□□□□ -2.38	not detected
snR61	snR61	MCM4	P30665	933 aa	Known RBP	0.17	□□□□□ -2.38
snR61	snR61	THI4	P32318	326 aa		0.17	□□□□□ -2.38
snR61	snR61	SIP2	P34164	415 aa	Known RBP	0.17	□□□□□ -2.38
snR61	snR61	PMU1	P36069	295 aa		0.17	□□□□□ -2.38
snR61	snR61	PHM8	P40025	321 aa		0.17	□□□□□ -2.38
snR61	snR61	NUP82	P40368	713 aa		0.17	□□□□□ -2.38
snR61	snR61	YIL060W	P40519	144 aa		0.17	□□□□□ -2.38
snR61	snR61	CHS6	P40955	746 aa		0.17	□□□□□ -2.38
snR61	snR61	DIA1	P54005	336 aa		0.17	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms