RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 MRPS9P38120 278 aa-0.19□□□□□ -2.44
snR38snR38 RFS1P38234 210 aaKnown RBP-0.19□□□□□ -2.44
snR38snR38 PCM1P38628 557 aaKnown RBP-0.19□□□□□ -2.44
snR38snR38 NMD2P38798 1089 aaKnown RBP-0.19□□□□□ -2.44
snR38snR38 YTA12P40341 825 aa-0.19□□□□□ -2.44
snR38snR38 IES1P43579 692 aa-0.19□□□□□ -2.44
snR38snR38 GUF1P46943 645 aa-0.19□□□□□ -2.44
snR38snR38 YJL049WP47048 450 aa-0.19□□□□□ -2.44
snR38snR38 TDA7P53882 636 aaPredicted RBP-0.19□□□□□ -2.44
snR38snR38 ECM9Q02202 377 aa-0.19□□□□□ -2.44
snR38snR38 VPS64Q03944 604 aa-0.19□□□□□ -2.44
snR38snR38 ATG33Q06485 197 aa-0.19□□□□□ -2.44
snR38snR38 CDC45Q08032 650 aa-0.19□□□□□ -2.44
snR38snR38 EDE1P34216 1381 aa-0.19□□□□□ -2.44
snR38snR38 ADH2P00331 348 aaKnown RBP-0.2□□□□□ -2.44
snR38snR38 ATR1P13090 542 aa-0.2□□□□□ -2.44
snR38snR38 LAC1P28496 418 aa-0.2□□□□□ -2.44
snR38snR38 CBF2P32504 956 aa-0.2□□□□□ -2.44
snR38snR38 MTC7P32633 139 aa-0.2□□□□□ -2.44
snR38snR38 MTC4P38335 694 aaKnown RBP-0.2□□□□□ -2.44
snR38snR38 IDS2P46958 469 aa-0.2□□□□□ -2.44
snR38snR38 MDR1P53258 950 aa-0.2□□□□□ -2.44
snR38snR38 RPC11Q04307 110 aaPredicted RBP-0.2□□□□□ -2.44
snR38snR38 YLR455WQ06188 304 aa-0.2□□□□□ -2.44
snR38snR38 WRS1Q12109 432 aaKnown RBP-0.2□□□□□ -2.44
snR38snR38 AYT1Q12226 474 aa-0.2□□□□□ -2.44
snR38snR38 SUL2Q12325 893 aa-0.2□□□□□ -2.44
snR38snR38 HMG1P12683 1054 aa-0.21□□□□□ -2.44
snR38snR38 VID24P38263 362 aa-0.21□□□□□ -2.44
snR38snR38 GDH3P39708 457 aa-0.21□□□□□ -2.44
snR38snR38 NPR2P39923 615 aa-0.21□□□□□ -2.44
snR38snR38 TIM54P47045 478 aa-0.21□□□□□ -2.44
snR38snR38 RTA1P53047 317 aa-0.21□□□□□ -2.44
snR38snR38 AIM14P53109 570 aa-0.21□□□□□ -2.44
snR38snR38 ENT4Q07872 247 aa-0.21□□□□□ -2.44
snR38snR38 FLC1Q08967 793 aa-0.21□□□□□ -2.44
snR38snR38 ERV2Q12284 196 aa-0.21□□□□□ -2.44
snR38snR38 HEM2P05373 342 aa-0.22□□□□□ -2.44
snR38snR38 YCK1P23291 538 aa-0.22□□□□□ -2.44
snR38snR38 RAD16P31244 790 aa-0.22□□□□□ -2.44
snR38snR38 DUG2P38149 878 aa-0.22□□□□□ -2.44
snR38snR38 ERC1P38767 581 aa-0.22□□□□□ -2.44
snR38snR38 ARO9P38840 513 aaPredicted RBP-0.22□□□□□ -2.44
snR38snR38 DSS1P39112 969 aa-0.22□□□□□ -2.44
snR38snR38 TIM17P39515 158 aa-0.22□□□□□ -2.44
snR38snR38 FUN12P39730 1002 aaKnown RBP-0.22□□□□□ -2.44
snR38snR38 REE1P40893 198 aa-0.22□□□□□ -2.44
snR38snR38 COS12P53053 380 aa-0.22□□□□□ -2.44
snR38snR38 FLC3P53121 802 aa-0.22□□□□□ -2.44
snR38snR38 YGL081WP53156 320 aa-0.22□□□□□ -2.44
snR38snR38 PEX25Q02969 394 aa-0.22□□□□□ -2.44
snR38snR38 JIP5Q06214 492 aaPredicted RBP-0.22□□□□□ -2.44
snR38snR38 MDM12Q92328 271 aa-0.22□□□□□ -2.44
snR38snR38 YER145C-AA0A023PYF4 145 aa-0.23□□□□□ -2.45
snR38snR38 PET123P17558 318 aa-0.23□□□□□ -2.45
snR38snR38 OLE1P21147 510 aaKnown RBP-0.23□□□□□ -2.45
snR38snR38 PDE1P22434 369 aa-0.23□□□□□ -2.45
snR38snR38 ACH1P32316 526 aa-0.23□□□□□ -2.45
snR38snR38 SPC34P36131 295 aa-0.23□□□□□ -2.45
snR38snR38 ALT2P52892 507 aa-0.23□□□□□ -2.45
snR38snR38 PEF1P53238 335 aa-0.23□□□□□ -2.45
snR38snR38 WSC2P53832 503 aa-0.23□□□□□ -2.45
snR38snR38 ASI1P54074 624 aa-0.23□□□□□ -2.45
snR38snR38 RSN1Q03516 953 aa-0.23□□□□□ -2.45
snR38snR38 MSS11Q03825 758 aa-0.23□□□□□ -2.45
snR38snR38 CSR1Q06705 408 aaKnown RBP-0.23□□□□□ -2.45
snR38snR38 FMP45Q07651 309 aa-0.23□□□□□ -2.45
snR38snR38 AAD4Q07747 329 aa-0.23□□□□□ -2.45
snR38snR38 LPD1P09624 499 aaKnown RBP-0.24□□□□□ -2.45
snR38snR38 MAS2P11914 482 aa-0.24□□□□□ -2.45
snR38snR38 CDC60P26637 1090 aaKnown RBP-0.24□□□□□ -2.45
snR38snR38 DGR2P32330 852 aa-0.24□□□□□ -2.45
snR38snR38 MF(ALPHA)2P32435 120 aa-0.24□□□□□ -2.45
snR38snR38 YME2P32843 850 aa-0.24□□□□□ -2.45
snR38snR38 SDH3P33421 198 aa-0.24□□□□□ -2.45
snR38snR38 RMA1P36001 430 aaKnown RBP-0.24□□□□□ -2.45
snR38snR38 PTK1P36002 662 aaPredicted RBP-0.24□□□□□ -2.45
snR38snR38 PMU1P36069 295 aa-0.24□□□□□ -2.45
snR38snR38 PHD1P36093 366 aa-0.24□□□□□ -2.45
snR38snR38 UBP13P38187 747 aa-0.24□□□□□ -2.45
snR38snR38 RFC1P38630 861 aaKnown RBP-0.24□□□□□ -2.45
snR38snR38 TDA3P38758 523 aa-0.24□□□□□ -2.45
snR38snR38 SEO1P39709 593 aa-0.24□□□□□ -2.45
snR38snR38 YFL067WP43537 175 aa-0.24□□□□□ -2.45
snR38snR38 BIO3P50277 480 aa-0.24□□□□□ -2.45
snR38snR38 VAM6Q07468 1049 aa-0.24□□□□□ -2.45
snR38snR38 YDL218WQ07629 317 aa-0.24□□□□□ -2.45
snR38snR38 BIK1P11709 440 aa-0.25□□□□□ -2.45
snR38snR38 CPR1P14832 162 aaKnown RBP-0.25□□□□□ -2.45
snR38snR38 KRS1P15180 591 aaKnown RBP-0.25□□□□□ -2.45
snR38snR38 PFK2P16862 959 aaKnown RBP RIP-Chip data-0.25□□□□□ -2.45not detected
snR38snR38 TYR1P20049 452 aa-0.25□□□□□ -2.45
snR38snR38 STE50P25344 346 aa-0.25□□□□□ -2.45
snR38snR38 CWH43P25618 953 aa-0.25□□□□□ -2.45
snR38snR38 MCM4P30665 933 aaKnown RBP-0.25□□□□□ -2.45
snR38snR38 VPS17P32913 551 aa-0.25□□□□□ -2.45
snR38snR38 KKQ8P36004 724 aa-0.25□□□□□ -2.45
snR38snR38 NPA3P47122 385 aa-0.25□□□□□ -2.45
snR38snR38 NBP1P52919 319 aaPredicted RBP-0.25□□□□□ -2.45
snR38snR38 RBA50Q04418 439 aa-0.25□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms