RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFG2	YLR397C	VAM7	P32912	316 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	RPT3	P33298	428 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	EAP1	P36041	632 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	YPK3	P38070	525 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	KSP1	P38691	1029 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	STB5	P38699	743 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	SSO2	P39926	295 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	PZF1	P39933	429 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	IMA5	P40884	581 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	SAP4	P53036	818 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	BUL2	Q03758	920 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	YDR249C	Q03787	373 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	SND1	Q04007	877 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	RHO1	P06780	209 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	NUC1	P08466	329 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	NFT1	P0CE68	1218 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	AEP2	P22136	580 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	SRO9	P25567	434 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	AAD3	P25612	363 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	HEM3	P28789	327 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	CPR5	P35176	225 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	MMM1	P41800	426 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	DAK2	P43550	591 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	MNT2	P53059	558 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	HPC2	Q01448	625 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	RPL6A	Q02326	176 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	UTP6	Q02354	440 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	YMR099C	Q03161	297 aa	Known RBP	7.35	□□□□□ -1.23
AFG2	YLR397C	NHP10	Q03435	203 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	FMN1	Q03778	218 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	PTC5	Q12511	572 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	ADF1	Q2V2Q1	113 aa		7.35	□□□□□ -1.23
AFG2	YLR397C	CBP2	P03874	630 aa	Predicted RBP	7.34	□□□□□ -1.23
AFG2	YLR397C	HO	P09932	586 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	CTS1	P29029	562 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	TSC10	P38342	320 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	RCK2	P38623	610 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	YHR202W	P38887	602 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	STL1	P39932	569 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	YMR134W	P40207	237 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	RSC9	Q03124	581 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	PAL1	Q05518	499 aa	Known RBP	7.34	□□□□□ -1.23
AFG2	YLR397C	THI20	Q08224	551 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	HAL9	Q12180	1030 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	NCB2	Q92317	146 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	AAC3	P18238	307 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	CHS3	P29465	1165 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	MEI5	P32489	222 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	ERG7	P38604	731 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	RIM11	P38615	370 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	SOH1	P38633	127 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	PSF2	P40359	213 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	YRB2	P40517	327 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	RSM26	P47141	266 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	ROM1	P53046	1155 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	SCS7	Q03529	384 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	THI3	Q07471	609 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	GSH2	Q08220	491 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	FEX1	Q08913	375 aa		7.34	□□□□□ -1.23
AFG2	YLR397C	BCK1	Q01389	1478 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	GAL10	P04397	699 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	MRP7	P12687	371 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	SNF4	P12904	322 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	NSP1	P14907	823 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	PRI2	P20457	528 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	KGD1	P20967	1014 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	CCA1	P21269	546 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	CHL1	P22516	861 aa	Predicted RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	CDC13	P32797	924 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	SEC61	P32915	480 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	MKS1	P34072	584 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	CUE2	P36075	443 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	MRPL7	P36519	292 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	MIT1	P40002	666 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	COS4	P43542	379 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	TPN1	P53099	579 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	COS1	P53822	381 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	RRP17	Q04031	235 aa	Predicted RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	TIF35	Q04067	274 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	MYO5	Q04439	1219 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	FMP45	Q07651	309 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	ARP7	Q12406	477 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	ATP6	P00854	259 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	TRP3	P00937	484 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	CTR86	P25355	563 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	NAM9	P27929	486 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	SPT14	P32363	452 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	VPS17	P32913	551 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	SER1	P33330	395 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	SIP2	P34164	415 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	TOD6	P34219	525 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	YBR137W	P38276	179 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	YDR089W	P38966	869 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	SAH1	P39954	449 aa	Known RBP	7.33	□□□□□ -1.24
AFG2	YLR397C	MRPS18	P42847	217 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	TIM54	P47045	478 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	SNX41	Q04053	625 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	YFT2	Q06676	274 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	MUM3	Q08750	479 aa		7.33	□□□□□ -1.24
AFG2	YLR397C	YOR012W	Q12351	137 aa		7.33	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms