RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 hCG_1642624A0A1W2PR95 340 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SHTN1A0MZ66 631 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GOLGA6L4A6NEF3 574 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 UBE2Q2LH0YL09 131 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GADD45BO75293 160 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SLURP2P0DP57 97 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 XBP1P17861 261 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 RPS12P25398 132 aaKnown RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GUCY1A2P33402 732 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GMPSP49915 693 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GNAQP50148 359 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 GRM4Q14833 912 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SPDYE2Q495Y8 402 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 CERKLQ49MI3 558 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 CCDC183Q5T5S1 534 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 TMTC3Q6ZXV5 915 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SH3BP5LQ7L8J4 393 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 NBPF11Q86T75 865 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 ZSCAN30Q86W11 494 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 FOXP4Q8IVH2 680 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SPATA32Q96LK8 384 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 CSRNP1Q96S65 589 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 RNF26Q9BY78 433 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 SCAND2PQ9GZW5 306 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 MYOZ2Q9NPC6 264 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 CLIP2Q9UDT6 1046 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 CFAP45Q9UL16 551 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 V9GY48 417 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-219ENST00000641513 PLIN4Q96Q06 1357 aa10.23□□□□□ -0.77
PHGDH-219ENST00000641513 PRPF3O43395 683 aaKnown RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 RAD21O60216 631 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 PARP1P09874 1014 aaKnown RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 TNNI2P48788 182 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 TERF1P54274 439 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 NBPF9Q3BBW0 867 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 BRAPQ7Z569 592 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 CLEC10AQ8IUN9 316 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 MICALL2Q8IY33 904 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 LRRC47Q8N1G4 583 aaKnown RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 SRBD1Q8N5C6 995 aaKnown RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 FAM151AQ8WW52 585 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 CCDC17Q96LX7 622 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 RBSNQ9H1K0 784 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 TSPY26PQ9H489 355 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.22□□□□□ -0.772e-7■■■■□ 19.6
PHGDH-219ENST00000641513 RTN4Q9NQC3 1192 aaKnown RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 MTMR4Q9NYA4 1195 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 KCNJ14Q9UNX9 436 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 CNTNAP5Q8WYK1 1306 aa10.22□□□□□ -0.77
PHGDH-219ENST00000641513 COL2A1P02458 1487 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-219ENST00000641513 FZD9O00144 591 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 GDF11O95390 407 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 TTLL1O95922 423 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 LMNB1P20700 586 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 PRELPP51888 382 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 KIF23Q02241 960 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-219ENST00000641513 ABCB5Q2M3G0 1257 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 STAG2Q8N3U4 1231 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 MTMR14Q8NCE2 650 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 MAP3K14Q99558 947 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.21□□□□□ -0.77
PHGDH-219ENST00000641513 DNAJC18Q9H819 358 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 CABP5Q9NP86 173 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
PHGDH-219ENST00000641513 RBM27Q9P2N5 1060 aaKnown RBP10.21□□□□□ -0.77
PHGDH-219ENST00000641513 CNOT7Q9UIV1 285 aaKnown RBP10.21□□□□□ -0.77
PHGDH-219ENST00000641513 ZNF541Q9H0D2 1346 aa10.21□□□□□ -0.78
PHGDH-219ENST00000641513 ATRNL1Q5VV63 1379 aa10.21□□□□□ -0.78
PHGDH-219ENST00000641513 IGKV6D-41A0A0C4DH26 115 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 USP17L5A8MUK1 530 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 KIF28PB7ZC32 967 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 H7C1D1 291 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 WNT10BO00744 389 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 MMP1P03956 469 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 MMP14P50281 582 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 CNTNAP1P78357 1384 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 STK38Q15208 465 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 SF3A1Q15459 793 aaKnown RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 CCDC96Q2M329 555 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 TBC1D10BQ4KMP7 808 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 FRMPD2Q68DX3 1309 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 ATL3Q6DD88 541 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 SAMD7Q7Z3H4 446 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 LEO1Q8WVC0 666 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 LZTS2Q9BRK4 669 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 SYT17Q9BSW7 474 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 TMEM39BQ9GZU3 492 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 VAT1LQ9HCJ6 419 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 GPCPD1Q9NPB8 672 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 MAD2L2Q9UI95 211 aa10.2□□□□□ -0.78
PHGDH-219ENST00000641513 HERC5Q9UII4 1024 aaKnown RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 SCAF8Q9UPN6 1271 aaKnown RBP10.2□□□□□ -0.78
PHGDH-219ENST00000641513 SYCE3A1L190 88 aa10.19□□□□□ -0.78
PHGDH-219ENST00000641513 PALM3A6NDB9 673 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms