RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 GDPD2Q9HCC8 539 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 CABP5Q9NP86 173 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 KCNQ5Q9NR82 932 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 NYAP2Q9P242 653 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 FAM198AQ9UFP1 575 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 BCS1LQ9Y276 419 aa11.21□□□□□ -0.61
PHGDH-215ENST00000641371 MYH4Q9Y623 1939 aa11.21□□□□□ -0.62
PHGDH-215ENST00000641371 DICER1Q9UPY3 1922 aaKnown RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 SMIM22K7EJ46 135 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 TBC1D12O60347 775 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 NMT2O60551 498 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 SHMT1P34896 483 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 ZNF280AP59817 542 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 GUCY1B3Q02153 619 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 CXCL9Q07325 125 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 NFIAQ12857 509 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 CERKLQ49MI3 558 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 ANO1Q5XXA6 986 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 ADALQ6DHV7 355 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 LRSAM1Q6UWE0 723 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 CCDC73Q6ZRK6 1079 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 DIS3L2Q8IYB7 885 aaKnown RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 LINC00301Q8NCQ3 95 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 BICD2Q8TD16 824 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 MKL1Q969V6 931 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 HOOK2Q96ED9 719 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 USP28Q96RU2 1077 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 PHF20Q9BVI0 1012 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 GZF1Q9H116 711 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 PPP1R1BQ9UD71 204 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 SEC63Q9UGP8 760 aaKnown RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 MAD2L2Q9UI95 211 aa11.2□□□□□ -0.62
PHGDH-215ENST00000641371 V9GY48 417 aaPredicted RBP11.2□□□□□ -0.62
PHGDH-215ENST00000641371 SIPA1L1O43166 1804 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 NFKBIEO00221 500 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 SPTLC2O15270 562 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 PLEKHA8P1O95397 391 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 SNHG28P0DPA3 235 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 TRAF1Q13077 416 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 PKN1Q16512 942 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 SLC4A8Q2Y0W8 1093 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 PPP1R18Q6NYC8 613 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 SRBD1Q8N5C6 995 aaKnown RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 DCAF4Q8WV16 495 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 ANP32BQ92688 251 aaKnown RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 RRP36Q96EU6 259 aaKnown RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 PRMT6Q96LA8 375 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 GLT8D2Q9H1C3 349 aa11.19□□□□□ -0.62
PHGDH-215ENST00000641371 TDRD3Q9H7E2 651 aaKnown RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 TFIP11Q9UBB9 837 aaKnown RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 ZNF70Q9UC06 446 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-215ENST00000641371 ESYT2A0FGR8 921 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 KLRF2D3W0D1 207 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 FZD9O00144 591 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 GADD45BO75293 160 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-215ENST00000641371 CAVIN2O95810 425 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 AKR1B1P15121 316 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 GNA11P29992 359 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 ME1P48163 572 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 FOSBP53539 338 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 NLRP5P59047 1200 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 EVX2Q03828 476 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 ORC2Q13416 577 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-215ENST00000641371 SLC39A14Q15043 492 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 RBM26Q5T8P6 1007 aaKnown RBP11.18□□□□□ -0.62
PHGDH-215ENST00000641371 CCDC34Q96HJ3 373 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-215ENST00000641371 CSRNP1Q96S65 589 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 NUP62CLQ9H1M0 184 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 SH2D4AQ9H788 454 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 TMEM63CQ9P1W3 806 aa11.18□□□□□ -0.62
PHGDH-215ENST00000641371 COL4A5P29400 1685 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 MPHOSPH10O00566 681 aaKnown RBP11.17□□□□□ -0.62
PHGDH-215ENST00000641371 PDHBP11177 359 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 TCP10Q12799 353 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 ABCB5Q2M3G0 1257 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 MCTP2Q6DN12 878 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 FAM173BQ6P4H8 233 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 CCDC82Q8N4S0 544 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 GMCL1P1Q8NEA9 526 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 MRPS27Q92552 414 aaKnown RBP11.17□□□□□ -0.62
PHGDH-215ENST00000641371 RIOX1Q9H6W3 641 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 ARHGEF10LQ9HCE6 1279 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 MYOZ2Q9NPC6 264 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 BARHL2Q9NY43 387 aa11.17□□□□□ -0.62
PHGDH-215ENST00000641371 DDTLA6NHG4 134 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-215ENST00000641371 TRIM75PA6NK02 468 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 BTBD18B2RXH4 712 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 KIF28PB7ZC32 967 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 KINO60870 393 aaKnown RBP11.16□□□□□ -0.62
PHGDH-215ENST00000641371 CUTAO60888 179 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 LMNB1P20700 586 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 CMA1P23946 247 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 GUCY1A2P33402 732 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 ICA1Q05084 483 aa11.16□□□□□ -0.62
PHGDH-215ENST00000641371 FAM160A1Q05DH4 1040 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms