RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 CWC22Q9HCG8 908 aaKnown RBP17.26■□□□□ 0.35
HNRNPU-229ENST00000640440 ALPK3Q96L96 1907 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 MINDY4BA8MYZ0 360 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 TDO2P48775 406 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 CCNA1P78396 465 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 ATP2B2Q01814 1243 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 TRIM32Q13049 653 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 SBK1Q52WX2 424 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 WDR78Q5VTH9 848 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 GIMAP6Q6P9H5 292 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 PLEKHH3Q7Z736 793 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 SIAH1Q8IUQ4 282 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 TRIB2Q92519 343 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 GCC1Q96CN9 775 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 DEFB118Q96PH6 123 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 EPB41L4AQ9HCS5 686 aaPredicted RBP17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 PAK6Q9NQU5 681 aaPredicted RBP17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 BTBD7Q9P203 1132 aa17.25■□□□□ 0.35
HNRNPU-229ENST00000640440 FRMPD3Q5JV73 1810 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 SGPL1O95470 568 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 APPP05067 770 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 GNAT2P19087 354 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 LPAR1Q92633 364 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 SEC62Q99442 399 aaKnown RBP17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.24■□□□□ 0.352e-15■■■■□ 21.1
HNRNPU-229ENST00000640440 VCPKMTQ9H867 229 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 TMX2Q9Y320 296 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 ROBO3Q96MS0 1386 aa17.24■□□□□ 0.35
HNRNPU-229ENST00000640440 FARP2O94887 1054 aaPredicted RBP17.23■□□□□ 0.35
HNRNPU-229ENST00000640440 EEF2P13639 858 aaKnown RBP17.23■□□□□ 0.35
HNRNPU-229ENST00000640440 RGS2P41220 211 aa17.23■□□□□ 0.35
HNRNPU-229ENST00000640440 MORN1Q5T089 497 aa17.23■□□□□ 0.35
HNRNPU-229ENST00000640440 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
HNRNPU-229ENST00000640440 FLOT1O75955 427 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 TFRCP02786 760 aaKnown RBP17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 ZKSCAN1P17029 563 aaPredicted RBP17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 RASA1P20936 1047 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 COG2Q14746 738 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 ZMYM1Q5SVZ6 1142 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 UBE2Q1Q7Z7E8 422 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 USP6NLQ92738 828 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 APBA2Q99767 749 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
HNRNPU-229ENST00000640440 ZNF236Q9UL36 1845 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 PLXNA1Q9UIW2 1896 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 PATL2C9JE40 543 aaKnown RBP17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 PRKAR2AP13861 404 aaKnown RBP17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 AAMPQ13685 434 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 CCL14Q16627 93 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 IFNL3Q8IZI9 196 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 HMX1Q9NP08 348 aaPredicted RBP17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
HNRNPU-229ENST00000640440 RPTORQ8N122 1335 aa17.21■□□□□ 0.34
HNRNPU-229ENST00000640440 WDR46O15213 610 aaKnown RBP17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 RAD21O60216 631 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 DSG3P32926 999 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 PDE1AP54750 535 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 MAP2K5Q13163 448 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 CCDC129Q6ZRS4 1044 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 NACAP1Q9BZK3 213 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 LNPKQ9C0E8 428 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 STAP2Q9UGK3 403 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 IVNS1ABPQ9Y6Y0 642 aa17.2■□□□□ 0.34
HNRNPU-229ENST00000640440 SLC15A5A6NIM6 579 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 PRDM1O75626 825 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 PTPREP23469 700 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 PLS1Q14651 629 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 MAP3K21Q5TCX8 1036 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 TRMT44Q8IYL2 757 aaKnown RBP17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 DPF3Q92784 378 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 EVI5LQ96CN4 794 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 MOV10L1Q9BXT6 1211 aaKnown RBP17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 SPATC1LQ9H0A9 340 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 CRISPLD2Q9H0B8 497 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 NAPBQ9H115 298 aa17.19■□□□□ 0.34
HNRNPU-229ENST00000640440 SMCHD1A6NHR9 2005 aa17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 GRB14Q14449 540 aa17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 B4GALNT3Q6L9W6 998 aa17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 HTATIP2Q9BUP3 242 aa17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 ZNF287Q9HBT7 754 aa17.18■□□□□ 0.34
HNRNPU-229ENST00000640440 H0YGN5 161 aa17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 ERCC3P19447 782 aa17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 CACNB2Q08289 660 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 FAM83BQ5T0W9 1011 aa17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 DIS3LQ8TF46 1054 aaKnown RBP17.17■□□□□ 0.34
HNRNPU-229ENST00000640440 FBXO28Q9NVF7 368 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms