RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 DRC7Q8IY82 874 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 KIAA1524Q8TCG1 905 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 TEKT1Q969V4 418 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 SPTLC3Q9NUV7 552 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 USP40Q9NVE5 1235 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 CUTAO60888 179 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 DDAH1O94760 285 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 PTGS1P23219 599 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 CRKP46108 304 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 ZRSR1Q15695 479 aaKnown RBP17.35■□□□□ 0.37
TRIM3-215ENST00000639856 CC2D2BQ6DHV5 1058 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 HHIPL2Q6UWX4 724 aa17.35■□□□□ 0.37
TRIM3-215ENST00000639856 hCG_1642624A0A1W2PR95 340 aa17.34■□□□□ 0.37
TRIM3-215ENST00000639856 FUT2Q10981 343 aa17.34■□□□□ 0.37
TRIM3-215ENST00000639856 RESP18Q5W5W9 173 aa17.34■□□□□ 0.37
TRIM3-215ENST00000639856 CCDC186Q7Z3E2 898 aa17.34■□□□□ 0.37
TRIM3-215ENST00000639856 ZNF444Q8N0Y2 327 aaPredicted RBP17.34■□□□□ 0.37
TRIM3-215ENST00000639856 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
TRIM3-215ENST00000639856 TOB1P50616 345 aaPredicted RBP17.33■□□□□ 0.37
TRIM3-215ENST00000639856 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.37
TRIM3-215ENST00000639856 MRFAP1L1Q96HT8 127 aa17.33■□□□□ 0.37
TRIM3-215ENST00000639856 BPIFA3Q9BQP9 254 aa17.33■□□□□ 0.37
TRIM3-215ENST00000639856 CLIP2Q9UDT6 1046 aa17.33■□□□□ 0.37
TRIM3-215ENST00000639856 CALM1P0DP23 149 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 CALM2P0DP24 149 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 CALM3P0DP25 149 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 NFIAQ12857 509 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 DPCR1Q3MIW9 517 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 CCDC93Q567U6 631 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 AOPEPQ8N6M6 819 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 UBE2Q2Q8WVN8 375 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 RBM28Q9NW13 759 aaKnown RBP17.33■□□□□ 0.36
TRIM3-215ENST00000639856 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 COL4A5P29400 1685 aa17.33■□□□□ 0.36
TRIM3-215ENST00000639856 CACNB3P54284 484 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 AKAP17AQ02040 695 aaKnown RBP17.32■□□□□ 0.36
TRIM3-215ENST00000639856 TMTC3Q6ZXV5 915 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 C17orf53Q8N3J3 647 aaPredicted RBP17.32■□□□□ 0.36
TRIM3-215ENST00000639856 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 SHISA4Q96DD7 197 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 NRBP1Q9UHY1 535 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 NLRP12P59046 1061 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 NR5A1Q13285 461 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 PKN1Q16512 942 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 DGKHQ86XP1 1220 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
TRIM3-215ENST00000639856 ZDHHC15Q96MV8 337 aa17.32■□□□□ 0.36
TRIM3-215ENST00000639856 ZNF277Q9NRM2 450 aaPredicted RBP17.32■□□□□ 0.36
TRIM3-215ENST00000639856 MYH8P13535 1937 aa17.31■□□□□ 0.36
TRIM3-215ENST00000639856 PRPF3O43395 683 aaKnown RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 XBP1P17861 261 aa17.31■□□□□ 0.36
TRIM3-215ENST00000639856 RBM5P52756 815 aaKnown RBP eCLIP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 FKBP1AP62942 108 aaKnown RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 DNTTIP2Q5QJE6 756 aaKnown RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 SRBD1Q8N5C6 995 aaKnown RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 PNMA1Q8ND90 353 aa17.31■□□□□ 0.36
TRIM3-215ENST00000639856 CTCFLQ8NI51 663 aaPredicted RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 V9GY48 417 aaPredicted RBP17.31■□□□□ 0.36
TRIM3-215ENST00000639856 CNTNAP5Q8WYK1 1306 aa17.31■□□□□ 0.36
TRIM3-215ENST00000639856 CCDC125Q86Z20 511 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 ZFPM1Q8IX07 1006 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 ANKS1AQ92625 1134 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
TRIM3-215ENST00000639856 ZNF287Q9HBT7 754 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 TCP11L1Q9NUJ3 509 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 TUBE1Q9UJT0 475 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 PSME4Q14997 1843 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 BIN1O00499 593 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 SLURP2P0DP57 97 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 GABPAQ06546 454 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 RASGRP2Q7LDG7 609 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 RTKN2Q8IZC4 609 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 OXER1Q8TDS5 423 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 KCNH3Q9ULD8 1083 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 MTMR7Q9Y216 660 aa17.3■□□□□ 0.36
TRIM3-215ENST00000639856 PTPREP23469 700 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 NT5C2P49902 561 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 PSMD1Q99460 953 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 TMEM47Q9BQJ4 181 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 VPS54Q9P1Q0 977 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 STAG2Q8N3U4 1231 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 NEDD1Q8NHV4 660 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 PHF20Q9BVI0 1012 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 FBXO2Q9UK22 296 aaPredicted RBP17.29■□□□□ 0.36
TRIM3-215ENST00000639856 PCDHB6Q9Y5E3 794 aa17.29■□□□□ 0.36
TRIM3-215ENST00000639856 TCP10Q12799 353 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 CCDC144BQ3MJ40 725 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 CEP95Q96GE4 821 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 CEP131Q9UPN4 1083 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 SIPA1L1O43166 1804 aa17.28■□□□□ 0.36
TRIM3-215ENST00000639856 RAD17O75943 681 aa17.27■□□□□ 0.36
TRIM3-215ENST00000639856 LRMPQ12912 555 aa17.27■□□□□ 0.36
TRIM3-215ENST00000639856 R3HDM1Q15032 1099 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms