RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 MAD2L2Q9UI95 211 aa17.62■□□□□ 0.41
SCN8A-214ENST00000637709 LRRC37AA6NMS7 1700 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 SCG2P13521 617 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 ARID5BQ14865 1188 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 SHROOM1Q2M3G4 852 aaPredicted RBP17.61■□□□□ 0.41
SCN8A-214ENST00000637709 RILPL1Q5EBL4 403 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CEP95Q96GE4 821 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 ANO10Q9NW15 660 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 HPSEQ9Y251 543 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 SNED1Q8TER0 1413 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 SLX4Q8IY92 1834 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 PRR29P0C7W0 189 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CALM1P0DP23 149 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CALM2P0DP24 149 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CALM3P0DP25 149 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 ZNF75DP51815 510 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 TCP10Q12799 353 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 NFIAQ12857 509 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CCDC186Q7Z3E2 898 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 ZFPM1Q8IX07 1006 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 PYCARDQ9ULZ3 195 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 FAM205AQ6ZU69 1335 aa17.61■□□□□ 0.41
SCN8A-214ENST00000637709 XBP1P17861 261 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 RCAN1P53805 252 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 FRMPD2Q68DX3 1309 aaPredicted RBP17.6■□□□□ 0.41
SCN8A-214ENST00000637709 A0A087X0B3 334 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 CDC25AP30304 524 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 MCM7P33993 719 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 CCDC144BQ3MJ40 725 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 CEP57L1Q8IYX8 460 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 LRRC47Q8N1G4 583 aaKnown RBP17.6■□□□□ 0.41
SCN8A-214ENST00000637709 STAMQ92783 540 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.6■□□□□ 0.41
SCN8A-214ENST00000637709 SERTAD1Q9UHV2 236 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 SCN9AQ15858 1988 aa17.6■□□□□ 0.41
SCN8A-214ENST00000637709 CUTAO60888 179 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 POTEAQ6S8J7 498 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 PDE6BP35913 854 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 RBM5P52756 815 aaKnown RBP eCLIP17.59■□□□□ 0.41
SCN8A-214ENST00000637709 MASTLQ96GX5 879 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 COA1Q9GZY4 146 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 UBA5Q9GZZ9 404 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 USP40Q9NVE5 1235 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
SCN8A-214ENST00000637709 RGS17Q9UGC6 210 aaPredicted RBP17.59■□□□□ 0.41
SCN8A-214ENST00000637709 VWA3AA6NCI4 1184 aa17.58■□□□□ 0.41
SCN8A-214ENST00000637709 RAD21O60216 631 aa17.58■□□□□ 0.41
SCN8A-214ENST00000637709 ATP2B2Q01814 1243 aa17.58■□□□□ 0.41
SCN8A-214ENST00000637709 PFKFB3Q16875 520 aaPredicted RBP17.58■□□□□ 0.41
SCN8A-214ENST00000637709 C16orf86Q6ZW13 317 aa17.58■□□□□ 0.41
SCN8A-214ENST00000637709 PLA2G4DQ86XP0 818 aa17.58■□□□□ 0.41
SCN8A-214ENST00000637709 GAKO14976 1311 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 TRIM75PA6NK02 468 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 PTPREP23469 700 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 KRBA2Q6ZNG9 492 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 TBC1D22AQ8WUA7 517 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 PCDHA5Q9Y5H7 936 aa17.58■□□□□ 0.4
SCN8A-214ENST00000637709 ROBO3Q96MS0 1386 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 AKR1B1P15121 316 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 LMOD1P29536 600 aaPredicted RBP17.57■□□□□ 0.4
SCN8A-214ENST00000637709 ALDH1B1P30837 517 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 AOC3Q16853 763 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 DGKHQ86XP1 1220 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 DHX58Q96C10 678 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 USP17L5A8MUK1 530 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 BMP6P22004 513 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 KIF5BP33176 963 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 AFMP43652 599 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 PTGDRQ13258 359 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 PPP2R5BQ15173 497 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 FILIP1Q7Z7B0 1213 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 TNFRSF25Q93038 417 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 R3HCC1Q9Y3T6 440 aaKnown RBP17.57■□□□□ 0.4
SCN8A-214ENST00000637709 MYH8P13535 1937 aa17.57■□□□□ 0.4
SCN8A-214ENST00000637709 KLRF2D3W0D1 207 aa17.56■□□□□ 0.4
SCN8A-214ENST00000637709 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
SCN8A-214ENST00000637709 TTC38Q5R3I4 469 aa17.56■□□□□ 0.4
SCN8A-214ENST00000637709 NRXN2Q9P2S2 1712 aa17.56■□□□□ 0.4
SCN8A-214ENST00000637709 ZNF500O60304 480 aaPredicted RBP17.56■□□□□ 0.4
SCN8A-214ENST00000637709 CDC42EP5Q6NZY7 148 aa17.56■□□□□ 0.4
SCN8A-214ENST00000637709 SYMPKQ92797 1274 aaKnown RBP17.56■□□□□ 0.4
SCN8A-214ENST00000637709 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
SCN8A-214ENST00000637709 H0YIN7 160 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 MPHOSPH10O00566 681 aaKnown RBP17.55■□□□□ 0.4
SCN8A-214ENST00000637709 NLRP12P59046 1061 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 GRM4Q14833 912 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 DEFB132Q7Z7B7 95 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 BRMS1Q9HCU9 246 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 IL17AQ16552 155 aa17.55■□□□□ 0.4
SCN8A-214ENST00000637709 SRPRBQ9Y5M8 271 aaKnown RBP17.55■□□□□ 0.4
SCN8A-214ENST00000637709 COBLO75128 1261 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 PLCG2P16885 1265 aa17.54■□□□□ 0.4
SCN8A-214ENST00000637709 DNTTIP2Q5QJE6 756 aaKnown RBP17.54■□□□□ 0.4
SCN8A-214ENST00000637709 APOBEC3HQ6NTF7 200 aaKnown RBP17.54■□□□□ 0.4
SCN8A-214ENST00000637709 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms