RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 ZNF165P49910 485 aa21.52■■□□□ 1.03
CLN5-219ENST00000637537 C11orf57Q6ZUT1 292 aaPredicted RBP21.52■■□□□ 1.03
CLN5-219ENST00000637537 DGKHQ86XP1 1220 aa21.52■■□□□ 1.03
CLN5-219ENST00000637537 CAMKK2Q96RR4 588 aa21.52■■□□□ 1.03
CLN5-219ENST00000637537 PHF20Q9BVI0 1012 aa21.52■■□□□ 1.03
CLN5-219ENST00000637537 GRIN1Q05586 938 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 MYH1P12882 1939 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 CTAGE5O15320 804 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 PPP6R2O75170 966 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 EYA3Q99504 573 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 TTC12Q9H892 705 aaPredicted RBP21.51■■□□□ 1.03
CLN5-219ENST00000637537 DDX4Q9NQI0 724 aaKnown RBP21.51■■□□□ 1.03
CLN5-219ENST00000637537 SLX4Q8IY92 1834 aa21.51■■□□□ 1.03
CLN5-219ENST00000637537 DDX60LQ5H9U9 1706 aaKnown RBP21.5■■□□□ 1.03
CLN5-219ENST00000637537 XBP1P17861 261 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 C16orf86Q6ZW13 317 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 CERS3Q8IU89 383 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 ADAMTSL1Q8N6G6 1762 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 ADAMTS3O15072 1205 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 TMEM47Q9BQJ4 181 aa21.5■■□□□ 1.03
CLN5-219ENST00000637537 RILPL1Q5EBL4 403 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 JMYQ8N9B5 988 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 PCDHAC2Q9Y5I4 1007 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 SNED1Q8TER0 1413 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 GOLGA8HP0CJ92 632 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 KRT2P35908 639 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 NPY5RQ15761 445 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 C17orf53Q8N3J3 647 aaPredicted RBP21.49■■□□□ 1.03
CLN5-219ENST00000637537 CPVLQ9H3G5 476 aa21.49■■□□□ 1.03
CLN5-219ENST00000637537 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.49■■□□□ 1.03
CLN5-219ENST00000637537 WNT7AO00755 349 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 SLURP2P0DP57 97 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 SCG2P13521 617 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 KIF5BP33176 963 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 KIAA0825Q8IV33 1275 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 GPKOWQ92917 476 aaPredicted RBP eCLIP21.48■■□□□ 1.03
CLN5-219ENST00000637537 USP40Q9NVE5 1235 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 STK32BQ9NY57 414 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 MAD2L2Q9UI95 211 aa21.48■■□□□ 1.03
CLN5-219ENST00000637537 SYKP43405 635 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 SLC35G1Q2M3R5 365 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 BIN1O00499 593 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 STX1AQ16623 288 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 ANKRD7Q92527 254 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 ZNF287Q9HBT7 754 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 TCP11L1Q9NUJ3 509 aa21.47■■□□□ 1.03
CLN5-219ENST00000637537 DEFB132Q7Z7B7 95 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 PDCL2Q8N4E4 241 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 KRI1Q8N9T8 703 aaKnown RBP21.46■■□□□ 1.03
CLN5-219ENST00000637537 ANKS1AQ92625 1134 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 CEP95Q96GE4 821 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 HPSEQ9Y251 543 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 PFKFB3Q16875 520 aaPredicted RBP21.46■■□□□ 1.03
CLN5-219ENST00000637537 RESP18Q5W5W9 173 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 KIAA1468Q9P260 1216 aa21.46■■□□□ 1.03
CLN5-219ENST00000637537 CYTH3O43739 400 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 CACNB3P54284 484 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 NLRP5P59047 1200 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 ISM2Q6H9L7 571 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 STYK1Q6J9G0 422 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 CDC42EP5Q6NZY7 148 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 SUGT1Q9Y2Z0 365 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 SCN9AQ15858 1988 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 CUTAO60888 179 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 NFIAQ12857 509 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 GRM4Q14833 912 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 AOC3Q16853 763 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 APOBEC3HQ6NTF7 200 aaKnown RBP21.45■■□□□ 1.02
CLN5-219ENST00000637537 CLEC10AQ8IUN9 316 aa21.45■■□□□ 1.02
CLN5-219ENST00000637537 FBXO2Q9UK22 296 aaPredicted RBP21.45■■□□□ 1.02
CLN5-219ENST00000637537 ECE2O60344 883 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 PODNQ7Z5L7 613 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 NEDD1Q8NHV4 660 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 TEKT1Q969V4 418 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 EIF6P56537 245 aaKnown RBP21.44■■□□□ 1.02
CLN5-219ENST00000637537 IQCB1Q15051 598 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 SPC24Q8NBT2 197 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 TNFRSF25Q93038 417 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 KCNH3Q9ULD8 1083 aa21.44■■□□□ 1.02
CLN5-219ENST00000637537 FOCADQ5VW36 1801 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 DPCR1Q3MIW9 517 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 LONRF3Q496Y0 759 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 TYW1BQ6NUM6 668 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 KIAA1524Q8TCG1 905 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 PTPREP23469 700 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 CRKP46108 304 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 PIK3AP1Q6ZUJ8 805 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 USP49Q70CQ1 688 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 ZFPM1Q8IX07 1006 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 BRMS1Q9HCU9 246 aa21.43■■□□□ 1.02
CLN5-219ENST00000637537 CTIFO43310 598 aaKnown RBP21.42■■□□□ 1.02
CLN5-219ENST00000637537 ZNF174Q15697 407 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 ANO10Q9NW15 660 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 TRIM75PA6NK02 468 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 C21orf2O43822 256 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 RBM5P52756 815 aaKnown RBP eCLIP21.42■■□□□ 1.02
CLN5-219ENST00000637537 PNOCQ13519 176 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 CCDC178Q5BJE1 867 aa21.42■■□□□ 1.02
CLN5-219ENST00000637537 RGPD3A6NKT7 1758 aaPredicted RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms