RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 CROCC2H7BZ55 1655 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 PLCG2P16885 1265 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 COPB1P53618 953 aaKnown RBP17.68■□□□□ 0.42
CLN5-218ENST00000637397 TRIM58Q8NG06 486 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 GREM2Q9H772 168 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 DESP17661 470 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 BCAMP50895 628 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 KLHL30Q0D2K2 578 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 PLS1Q14651 629 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 NELFCDQ8IXH7 590 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 TEX11Q8IYF3 940 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 FBF1Q8TES7 1133 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 GSDMAQ96QA5 445 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 KCNK9Q9NPC2 374 aa17.68■□□□□ 0.42
CLN5-218ENST00000637397 POLR1AO95602 1720 aaPredicted RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 GJC1P36383 396 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 MRPL12P52815 198 aaKnown RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 ASIC2Q16515 512 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 KMT5BQ4FZB7 885 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 MED4Q9NPJ6 270 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 CCDC151A5D8V7 595 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 VIMP08670 466 aaKnown RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 GNGT1P63211 74 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 VWA3BQ502W6 1294 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 FAM71BQ8TC56 605 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 RPAP1Q9BWH6 1393 aaPredicted RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 GTPBP6O43824 516 aaPredicted RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 PCCAP05165 728 aaPredicted RBP17.67■□□□□ 0.42
CLN5-218ENST00000637397 KRT25Q7Z3Z0 450 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 BCAS4Q8TDM0 211 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 LRRC45Q96CN5 670 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 CABS1Q96KC9 395 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 LRRIQ1Q96JM4 1722 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 ARHGEF25Q86VW2 580 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 FAM204AQ9H8W3 233 aa17.67■□□□□ 0.42
CLN5-218ENST00000637397 PDE8BO95263 885 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 IGKV5-2P06315 115 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 GUCY2FP51841 1108 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 SF3A3Q12874 501 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLN5-218ENST00000637397 ANKRD13CQ8N6S4 541 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 ENOX1Q8TC92 643 aaKnown RBP17.66■□□□□ 0.42
CLN5-218ENST00000637397 NYXQ9GZU5 481 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 FOXP1Q9H334 677 aaPredicted RBP17.66■□□□□ 0.42
CLN5-218ENST00000637397 FAN1Q9Y2M0 1017 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 ZMYND10O75800 440 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 RPN1P04843 607 aaKnown RBP17.66■□□□□ 0.42
CLN5-218ENST00000637397 ACRBPQ8NEB7 543 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 BTG4Q9NY30 223 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 CALCOCO2Q13137 446 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 BLIDQ8IZY5 108 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 ATP1A2P50993 1020 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 INF2Q27J81 1249 aa17.66■□□□□ 0.42
CLN5-218ENST00000637397 CIAO1O76071 339 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 BICD1Q96G01 975 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 PPP1R1BQ9UD71 204 aaPredicted RBP17.65■□□□□ 0.42
CLN5-218ENST00000637397 ERVV-2B6SEH9 535 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 RPS6KA1Q15418 735 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 PPP1R7Q15435 360 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 SFMBT2Q5VUG0 894 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 FMR1NBQ8N0W7 255 aaPredicted RBP17.65■□□□□ 0.42
CLN5-218ENST00000637397 IL25Q9H293 177 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 ATP6V0A2Q9Y487 856 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 GLI2P10070 1586 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 RUFY4Q6ZNE9 571 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 SPHKAPQ2M3C7 1700 aa17.65■□□□□ 0.42
CLN5-218ENST00000637397 FMNL1O95466 1100 aaPredicted RBP17.64■□□□□ 0.42
CLN5-218ENST00000637397 EPB41P11171 864 aaKnown RBP17.64■□□□□ 0.42
CLN5-218ENST00000637397 SCG2P13521 617 aa17.64■□□□□ 0.42
CLN5-218ENST00000637397 PPP4R3AQ6IN85 833 aa17.64■□□□□ 0.42
CLN5-218ENST00000637397 ABCA6Q8N139 1617 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 E7EVH7 732 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 GYG1P46976 350 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 HNRNPH2P55795 449 aaKnown RBP17.64■□□□□ 0.41
CLN5-218ENST00000637397 CALCRLQ16602 461 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 GSTA5Q7RTV2 222 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 GPKOWQ92917 476 aaPredicted RBP eCLIP17.64■□□□□ 0.41
CLN5-218ENST00000637397 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.64■□□□□ 0.41
CLN5-218ENST00000637397 IKBKGQ9Y6K9 419 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 BUB1O43683 1085 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 ACTN2P35609 894 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 LIG3P49916 1009 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 CCDC6Q16204 474 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 ARHGAP25P42331 645 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 DAAM2Q86T65 1068 aa17.64■□□□□ 0.41
CLN5-218ENST00000637397 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
CLN5-218ENST00000637397 UTP11Q9Y3A2 253 aaKnown RBP17.64■□□□□ 0.41
CLN5-218ENST00000637397 EEF2P13639 858 aaKnown RBP17.63■□□□□ 0.41
CLN5-218ENST00000637397 GYS2P54840 703 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 CCDC24Q8N4L8 307 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 ZSWIM5Q9P217 1185 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 MTUS1Q9ULD2 1270 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 HYOU1Q9Y4L1 999 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 PCDHB6Q9Y5E3 794 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 SH2B2O14492 632 aaPredicted RBP17.63■□□□□ 0.41
CLN5-218ENST00000637397 MMP1P03956 469 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 SLFN14P0C7P3 912 aa17.63■□□□□ 0.41
CLN5-218ENST00000637397 CCDC50Q8IVM0 306 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms