RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 NMRK2Q9NPI5 230 aa3.09□□□□□ -1.91
GABRB3-223ENST00000637293 SH3GLB2Q9NR46 395 aa3.09□□□□□ -1.91
GABRB3-223ENST00000637293 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.09□□□□□ -1.91
GABRB3-223ENST00000637293 ABI2Q9NYB9 513 aaPredicted RBP3.09□□□□□ -1.91
GABRB3-223ENST00000637293 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.09□□□□□ -1.91
GABRB3-223ENST00000637293 TPCN1Q9ULQ1 816 aa3.09□□□□□ -1.91
GABRB3-223ENST00000637293 DIS3Q9Y2L1 958 aaKnown RBP3.09□□□□□ -1.91
GABRB3-223ENST00000637293 LRCH1Q9Y2L9 728 aa3.09□□□□□ -1.91
GABRB3-223ENST00000637293 GPC6Q9Y625 555 aaPredicted RBP3.09□□□□□ -1.91
GABRB3-223ENST00000637293 SLC4A7Q9Y6M7 1214 aa3.09□□□□□ -1.91
GABRB3-223ENST00000637293 A0A1B0GVC2 190 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 A0A1W2PP55 124 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 FAM221AA4D161 298 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 K7ESF4 209 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 NEMP1O14524 444 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 OPA1O60313 960 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 MAFKO60675 156 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CILPO75339 1184 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 BAIAP3O94812 1187 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 MBD4O95243 580 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ATE1O95260 518 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ASGR2P07307 311 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CELA3AP09093 270 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 NCAM1P13591 858 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 BPIP17213 487 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SDSP20132 328 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 LPOP22079 712 aaPredicted RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SCP2P22307 547 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 RPS6KB1P23443 525 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 IDH3AP50213 366 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CLNS1AP54105 237 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 WASHC5Q12768 1159 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SFSWAPQ12872 951 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 PPFIA1Q13136 1202 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 IFIT5Q13325 482 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CFAP100Q494V2 611 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 LINC01559Q495D7 138 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 TRIM61Q5EBN2 209 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 FAM209AQ5JX71 171 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SH3PXD2AQ5TCZ1 1133 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 XRRA1Q6P2D8 792 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 LDHAL6AQ6ZMR3 332 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 BNC2Q6ZN30 1099 aaPredicted RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 C1orf122Q6ZSJ8 110 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CHST15Q7LFX5 561 aaPredicted RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 KIF18BQ86Y91 864 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 COLGALT2Q8IYK4 626 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 FBXO27Q8NI29 283 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 RHPN1Q8TCX5 695 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 AFAP1L1Q8TED9 768 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 PARD3BQ8TEW8 1205 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 HDAC2Q92769 488 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 JARID2Q92833 1246 aaPredicted RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CNKSR1Q969H4 720 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ATP6V1E2Q96A05 226 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ZBTB10Q96DT7 871 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 HSPBAP1Q96EW2 488 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 FUBP3Q96I24 572 aaKnown RBP eCLIP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ZNF496Q96IT1 587 aaPredicted RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 EXOC2Q96KP1 924 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ZFRQ96KR1 1074 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 CCDC138Q96M89 665 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 AGBL1Q96MI9 1066 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 MYLK2Q9H1R3 596 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 LIN7BQ9HAP6 207 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 AGO4Q9HCK5 861 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ABCB6Q9NP58 842 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 C11orf16Q9NQ32 467 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 KMT5AQ9NQR1 393 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 TBC1D22BQ9NU19 505 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 TMEM63CQ9P1W3 806 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SUCOQ9UBS9 1254 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ZBTB21Q9ULJ3 1066 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 SYNPO2Q9UMS6 1093 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 RTCBQ9Y3I0 505 aaKnown RBP3.08□□□□□ -1.92
GABRB3-223ENST00000637293 GJA3Q9Y6H8 435 aa3.08□□□□□ -1.92
GABRB3-223ENST00000637293 ANKRD18BA2A2Z9 1011 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 A6NCN8 305 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 TRIM75PA6NK02 468 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 MEIS3P2A8K0S8 358 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 UPK3BL1B0FP48 263 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 UPK3BL2E5RIL1 263 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 KPNA6O60684 536 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 CTNND1O60716 968 aaKnown RBP3.07□□□□□ -1.92
GABRB3-223ENST00000637293 ULK1O75385 1050 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 DNAJC8O75937 253 aaPredicted RBP3.07□□□□□ -1.92
GABRB3-223ENST00000637293 MAP3K6O95382 1288 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 IL33O95760 270 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 BAG2O95816 211 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 APBA3O96018 575 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 TGFB3P10600 412 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 RHCEP18577 417 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 PSMA3P25788 255 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 OAS2P29728 719 aaKnown RBP3.07□□□□□ -1.92
GABRB3-223ENST00000637293 CTNNA1P35221 906 aaKnown RBP3.07□□□□□ -1.92
GABRB3-223ENST00000637293 IGFALSP35858 605 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 CAP2P40123 477 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 PEX19P40855 299 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 TSPAN7P41732 249 aa3.07□□□□□ -1.92
GABRB3-223ENST00000637293 PIK3CAP42336 1068 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms