RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 TTLL1O95922 423 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 CYP21A2P08686 494 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 BCRP11274 1271 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 NOVP48745 357 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.57
LINC00339-210ENST00000635675 CASC1Q6TDU7 716 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 CATSPERGQ6ZRH7 1159 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 P2RX7Q99572 595 aaKnown RBP11.52□□□□□ -0.57
LINC00339-210ENST00000635675 TOMM22Q9NS69 142 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 TCP11L1Q9NUJ3 509 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
LINC00339-210ENST00000635675 NEDD4P46934 1319 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 NMT2O60551 498 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 GCLCP48506 637 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-210ENST00000635675 NT5C2P49902 561 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 IRX3P78415 501 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-210ENST00000635675 PPP4R3BQ5MIZ7 849 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 SPICE1Q8N0Z3 855 aa11.51□□□□□ -0.57
LINC00339-210ENST00000635675 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-210ENST00000635675 RPAP3Q9H6T3 665 aaPredicted RBP11.51□□□□□ -0.57
LINC00339-210ENST00000635675 RBM8AQ9Y5S9 174 aaKnown RBP11.51□□□□□ -0.57
LINC00339-210ENST00000635675 F5H6K3 240 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 HERVK_113P62684 666 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 CAP1Q01518 475 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 KLRC3Q07444 240 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 NECTIN1Q15223 517 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 ESR2Q92731 530 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 ERO1AQ96HE7 468 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 GOPCQ9HD26 462 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 ANO2Q9NQ90 1003 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 TAF6LQ9Y6J9 622 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 MYH4Q9Y623 1939 aa11.5□□□□□ -0.57
LINC00339-210ENST00000635675 B4E1Z4 1266 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 WDR46O15213 610 aaKnown RBP11.49□□□□□ -0.57
LINC00339-210ENST00000635675 KDM4AO75164 1064 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 NDUFB10O96000 172 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 LACTBP83111 547 aaPredicted RBP11.49□□□□□ -0.57
LINC00339-210ENST00000635675 COG2Q14746 738 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 RCSD1Q6JBY9 416 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 LBX2Q6XYB7 198 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 LRRC47Q8N1G4 583 aaKnown RBP11.49□□□□□ -0.57
LINC00339-210ENST00000635675 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 CD99L2Q8TCZ2 262 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 TTC14Q96N46 770 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 KRT23Q9C075 422 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 CNNM2Q9H8M5 875 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 ZSWIM5Q9P217 1185 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 RBPJLQ9UBG7 517 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
LINC00339-210ENST00000635675 RLFQ13129 1914 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 SPDYE16A6NNV3 312 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-210ENST00000635675 CTGFP29279 349 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 STOX1Q6ZVD7 989 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 CTU1Q7Z7A3 348 aaKnown RBP11.48□□□□□ -0.57
LINC00339-210ENST00000635675 GTF3C2Q8WUA4 911 aaPredicted RBP11.48□□□□□ -0.57
LINC00339-210ENST00000635675 TANGO6Q9C0B7 1094 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 ARHGAP39Q9C0H5 1083 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 TXNRD2Q9NNW7 524 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 MORF4L1Q9UBU8 362 aa11.48□□□□□ -0.57
LINC00339-210ENST00000635675 E7EWF7 191 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 SLC27A2O14975 620 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 RAD21O60216 631 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 PEX10O60683 326 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 TOP1P11387 765 aaKnown RBP11.47□□□□□ -0.57
LINC00339-210ENST00000635675 DSG3P32926 999 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 FAM83BQ5T0W9 1011 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 CREB3L3Q68CJ9 461 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 SLFN13Q68D06 897 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 OTOP1Q7RTM1 612 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 DGKHQ86XP1 1220 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 ANKS1AQ92625 1134 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 ZSCAN10Q96SZ4 725 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-210ENST00000635675 NUP88Q99567 741 aaPredicted RBP11.47□□□□□ -0.57
LINC00339-210ENST00000635675 TMEM47Q9BQJ4 181 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 ZKSCAN3Q9BRR0 538 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 RABGAP1Q9Y3P9 1069 aa11.47□□□□□ -0.57
LINC00339-210ENST00000635675 PARP14Q460N5 1801 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 CNMDO75829 334 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 FLOT1O75955 427 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 PSMC4P43686 418 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 TRDNQ13061 729 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 KIF22Q14807 665 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 ARHGEF6Q15052 776 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 Q3C1V9 767 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 CCDC178Q5BJE1 867 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
LINC00339-210ENST00000635675 IQCA1Q86XH1 822 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms