RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 CADPSQ9ULU8 1353 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 GFRA2O00451 464 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 EOMESO95936 686 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 CFPP27918 469 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 KIR3DL1P43629 444 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 RPL6Q02878 288 aaKnown RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 ARID5AQ03989 594 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 GNL2Q13823 731 aaKnown RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 COL9A2Q14055 689 aaPredicted RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 HDXQ7Z353 690 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 REC114Q7Z4M0 266 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 MCF2L2Q86YR7 1114 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 FBXO27Q8NI29 283 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 NKD1Q969G9 470 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 ARMC5Q96C12 935 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 LIN37Q96GY3 246 aaPredicted RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 PKNOX2Q96KN3 472 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 CARS2Q9HA77 564 aaKnown RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 PRDM7Q9NQW5 492 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 GINM1Q9NU53 330 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 TPX2Q9ULW0 747 aaKnown RBP4.14□□□□□ -1.75
PSPC1-208ENST00000635562 PCDHA4Q9UN74 947 aa4.14□□□□□ -1.75
PSPC1-208ENST00000635562 DCDC2CA8MYV0 355 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 ZSCAN22P10073 491 aaPredicted RBP4.13□□□□□ -1.75
PSPC1-208ENST00000635562 DNAJA1P31689 397 aaKnown RBP4.13□□□□□ -1.75
PSPC1-208ENST00000635562 CDK8P49336 464 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 TMED8Q6PL24 325 aaPredicted RBP4.13□□□□□ -1.75
PSPC1-208ENST00000635562 TMPRSS7Q7RTY8 843 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 ALPK1Q96QP1 1244 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 SEMA3GQ9NS98 782 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 POLR3KQ9Y2Y1 108 aaPredicted RBP4.13□□□□□ -1.75
PSPC1-208ENST00000635562 PRR36Q9H6K5 1346 aa4.13□□□□□ -1.75
PSPC1-208ENST00000635562 ATE1O95260 518 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 TMEM253P0C7T8 217 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 RBL2Q08999 1139 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 APOBRQ0VD83 1088 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 INPP5AQ14642 412 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 LILRA6Q6PI73 481 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 LRFN4Q6PJG9 635 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 PRR23BQ6ZRT6 265 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 AMIGO3Q86WK7 504 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 C12orf40Q86WS4 652 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 VPS37DQ86XT2 251 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 C1QL4Q86Z23 238 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 REXO1Q8N1G1 1221 aaKnown RBP4.12□□□□□ -1.75
PSPC1-208ENST00000635562 PIWIL2Q8TC59 973 aaKnown RBP4.12□□□□□ -1.75
PSPC1-208ENST00000635562 UBXN4Q92575 508 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 JARID2Q92833 1246 aaPredicted RBP4.12□□□□□ -1.75
PSPC1-208ENST00000635562 HSPA12BQ96MM6 686 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 SLC26A8Q96RN1 970 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 TANGO6Q9C0B7 1094 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 EPB41L4BQ9H329 900 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 ATP13A1Q9HD20 1204 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 EFR3BQ9Y2G0 817 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 CSADQ9Y600 493 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 TACC3Q9Y6A5 838 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 SNCAIPQ9Y6H5 919 aa4.12□□□□□ -1.75
PSPC1-208ENST00000635562 TLR3O15455 904 aaKnown RBP4.11□□□□□ -1.75
PSPC1-208ENST00000635562 SLITRK5O94991 958 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 MED14OSP0DP75 135 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 SRFP11831 508 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 LMNB1P20700 586 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 GLDCP23378 1020 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 NASPP49321 788 aaPredicted RBP4.11□□□□□ -1.75
PSPC1-208ENST00000635562 CWF19L2Q2TBE0 894 aaKnown RBP4.11□□□□□ -1.75
PSPC1-208ENST00000635562 SEZ6Q53EL9 994 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 FYB2Q5VWT5 728 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 DIEXFQ68CQ4 756 aaKnown RBP4.11□□□□□ -1.75
PSPC1-208ENST00000635562 CIAPIN1Q6FI81 312 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 LETMD1Q6P1Q0 360 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 HID1Q8IV36 788 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 PLPPR2Q96GM1 343 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 SHDQ96IW2 340 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 MIPEPQ99797 713 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 WNT10AQ9GZT5 417 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 NSUN3Q9H649 340 aaKnown RBP4.11□□□□□ -1.75
PSPC1-208ENST00000635562 EHMT1Q9H9B1 1298 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 PRDM16Q9HAZ2 1276 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 BRMS1Q9HCU9 246 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 STRIP2Q9ULQ0 834 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 ST14Q9Y5Y6 855 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 CAPN6Q9Y6Q1 641 aa4.11□□□□□ -1.75
PSPC1-208ENST00000635562 PRAMEF27A3QJZ7 478 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 TCAF2A6NFQ2 919 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 C1QTNF9P0C862 333 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 ATP2B1P20020 1258 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 ETF1P62495 437 aaKnown RBP4.1□□□□□ -1.75
PSPC1-208ENST00000635562 CLCQ05315 142 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 SLBPQ14493 270 aaKnown RBP eCLIP4.1□□□□□ -1.75
PSPC1-208ENST00000635562 WIPI1Q5MNZ9 446 aaPredicted RBP4.1□□□□□ -1.75
PSPC1-208ENST00000635562 CDKAL1Q5VV42 579 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 LCNL1Q6ZST4 164 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 RBBP8NLQ8NC74 664 aaPredicted RBP4.1□□□□□ -1.75
PSPC1-208ENST00000635562 ABHD4Q8TB40 342 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.1□□□□□ -1.751e-23■□□□□ 11
PSPC1-208ENST00000635562 CD320Q9NPF0 282 aa4.1□□□□□ -1.75
PSPC1-208ENST00000635562 DCP1AQ9NPI6 582 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms