RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 V9GY48 417 aaPredicted RBP13.43□□□□□ -0.26
TP53-228ENST00000635293 SPTLC2O15270 562 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 AKR1B1P15121 316 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 LIG1P18858 919 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 KRT2P35908 639 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 ME1P48163 572 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 RILPL1Q5EBL4 403 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 CCDC73Q6ZRK6 1079 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 MTMR14Q8NCE2 650 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 TSPY26PQ9H489 355 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 MTMR4Q9NYA4 1195 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 CLIC4Q9Y696 253 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 PARP1P09874 1014 aaKnown RBP13.42□□□□□ -0.26
TP53-228ENST00000635293 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 SLC39A14Q15043 492 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 SF3A1Q15459 793 aaKnown RBP13.42□□□□□ -0.26
TP53-228ENST00000635293 ADALQ6DHV7 355 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 OGFOD1Q8N543 542 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 ANP32BQ92688 251 aaKnown RBP13.42□□□□□ -0.26
TP53-228ENST00000635293 UPF1Q92900 1129 aaKnown RBP eCLIP13.42□□□□□ -0.268e-7■■■□□ 18.8
TP53-228ENST00000635293 CLSTN2Q9H4D0 955 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 RRAGDQ9NQL2 400 aaPredicted RBP13.42□□□□□ -0.26
TP53-228ENST00000635293 VPS54Q9P1Q0 977 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 PCDHAC2Q9Y5I4 1007 aa13.42□□□□□ -0.26
TP53-228ENST00000635293 MORC2Q9Y6X9 1032 aaPredicted RBP13.42□□□□□ -0.26
TP53-228ENST00000635293 BTBD18B2RXH4 712 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 PPP6R2O75170 966 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 RAD17O75943 681 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 TTLL1O95922 423 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 CALML3P27482 149 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 CCDC173Q0VFZ6 552 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 FKBP1CQ5VVH2 108 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
TP53-228ENST00000635293 FOXP4Q8IVH2 680 aaPredicted RBP13.41□□□□□ -0.26
TP53-228ENST00000635293 MRPS27Q92552 414 aaKnown RBP13.41□□□□□ -0.26
TP53-228ENST00000635293 PPP1R9BQ96SB3 815 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 TRIM34Q9BYJ4 488 aa13.41□□□□□ -0.26
TP53-228ENST00000635293 DICER1Q9UPY3 1922 aaKnown RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 FAM160A1Q05DH4 1040 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 DLGAP5Q15398 846 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 MAP3K11Q16584 847 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 ASPRV1Q53RT3 343 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 CCDC148Q8NFR7 591 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 JDP2Q8WYK2 163 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 DACT1Q9NYF0 836 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 PCDHA7Q9UN72 937 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 BAZ2BQ9UIF8 2168 aaKnown RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 DDTLA6NHG4 134 aaPredicted RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 CACNB3P54284 484 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 TCP10Q12799 353 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 PTPAQ15257 358 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 TPRNQ4KMQ1 711 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 CIAPIN1Q6FI81 312 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 RBM43Q6ZSC3 357 aaKnown RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 ZSCAN29Q8IWY8 852 aaPredicted RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 ZFPM1Q8IX07 1006 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 STAG2Q8N3U4 1231 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 SHISA4Q96DD7 197 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 TRIM44Q96DX7 344 aaPredicted RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 PRMT6Q96LA8 375 aaPredicted RBP13.4□□□□□ -0.26
TP53-228ENST00000635293 DNAJC18Q9H819 358 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 CEP131Q9UPN4 1083 aa13.4□□□□□ -0.26
TP53-228ENST00000635293 KLRF2D3W0D1 207 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 hCG_1984214I3L0E3 225 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 NFKBIEO00221 500 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 CTAGE5O15320 804 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 BMP15O95972 392 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 SNHG28P0DPA3 235 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 PTGER2P43116 358 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 TNIP1Q15025 636 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 GALNT17Q6IS24 598 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 TATDN1Q6P1N9 297 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 SH3BP5LQ7L8J4 393 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 ZNF713Q8N859 430 aaPredicted RBP13.39□□□□□ -0.27
TP53-228ENST00000635293 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 TNMDQ9H2S6 317 aa13.39□□□□□ -0.27
TP53-228ENST00000635293 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.39□□□□□ -0.27
TP53-228ENST00000635293 HERC5Q9UII4 1024 aaKnown RBP13.39□□□□□ -0.27
TP53-228ENST00000635293 NOL7Q9UMY1 257 aaKnown RBP13.39□□□□□ -0.27
TP53-228ENST00000635293 NR1I2O75469 434 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 PDHBP11177 359 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 RPS12P25398 132 aaKnown RBP13.38□□□□□ -0.27
TP53-228ENST00000635293 CXCL9Q07325 125 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 NPY5RQ15761 445 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 DAGLBQ8NCG7 672 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 TNFRSF25Q93038 417 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 RBSNQ9H1K0 784 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 hCG_1642624A0A1W2PR95 340 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
TP53-228ENST00000635293 CLCN1P35523 988 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 TRAPPC10P48553 1259 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 NR5A1Q13285 461 aa13.38□□□□□ -0.27
TP53-228ENST00000635293 CERKLQ49MI3 558 aaPredicted RBP13.38□□□□□ -0.27
TP53-228ENST00000635293 AXDND1Q5T1B0 1012 aaPredicted RBP13.38□□□□□ -0.27
TP53-228ENST00000635293 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms