RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 EPC1Q9H2F5 836 aa12.15□□□□□ -0.46
PSPC1-207ENST00000635251 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.46
PSPC1-207ENST00000635251 COL14A1Q05707 1796 aaKnown RBP12.15□□□□□ -0.46
PSPC1-207ENST00000635251 BCL9LQ86UU0 1499 aa12.15□□□□□ -0.47
PSPC1-207ENST00000635251 SEC31AO94979 1220 aaKnown RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 GTF2E1P29083 439 aaPredicted RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 ERFEQ4G0M1 354 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 RRAGBQ5VZM2 374 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 PIK3AP1Q6ZUJ8 805 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 KIFC2Q96AC6 838 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 MRPL44Q9H9J2 332 aaKnown RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 ADD3Q9UEY8 706 aaKnown RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 PHLPP1O60346 1717 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 COL1A1P02452 1464 aaPredicted RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 COBLO75128 1261 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 PCP11498 1178 aaKnown RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 GPR161Q8N6U8 529 aaKnown RBP12.14□□□□□ -0.47
PSPC1-207ENST00000635251 IQUBQ8NA54 791 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 MYH6P13533 1939 aa12.14□□□□□ -0.47
PSPC1-207ENST00000635251 SEMA3EO15041 775 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 NMT2O60551 498 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 ZRANB2O95218 330 aaKnown RBP eCLIP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 CASP14P31944 242 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 MCM7P33993 719 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 CCT6AP40227 531 aaKnown RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 FAM47AQ5JRC9 791 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 CDKAL1Q5VV42 579 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 RAD9BQ6WBX8 426 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 SRBD1Q8N5C6 995 aaKnown RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 GOLGA1Q92805 767 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 TNFRSF25Q93038 417 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 KIF5CO60282 957 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 MFAP3LO75121 409 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 SCG2P13521 617 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 PLA2G4AP47712 749 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 BICDL1Q6ZP65 573 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 CNGA4Q8IV77 575 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 ANKRD20A12PQ8NF67 263 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 FAM84BQ96KN1 310 aaPredicted RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 PYM1Q9BRP8 204 aaKnown RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
PSPC1-207ENST00000635251 MINPP1Q9UNW1 487 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 ADGRG1Q9Y653 693 aa12.13□□□□□ -0.47
PSPC1-207ENST00000635251 XDHP47989 1333 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 N4BP3O15049 544 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 NPY5RQ15761 445 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 C3orf67Q6ZVT6 689 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
PSPC1-207ENST00000635251 COL4A1P02462 1669 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 FGRP09769 529 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 PBX1P40424 430 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 MECOMQ03112 1051 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 VPS16Q9H269 839 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 ZSWIM4Q9H7M6 989 aa12.12□□□□□ -0.47
PSPC1-207ENST00000635251 ATP8B1O43520 1251 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 GTPBP6O43824 516 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 TXLNAP40222 546 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 TRAPPC10P48553 1259 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 EVX2Q03828 476 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 PAK1Q13153 545 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 SLC4A8Q2Y0W8 1093 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 ZNF569Q5MCW4 686 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 CC2D1AQ6P1N0 951 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 RABGGTAQ92696 567 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 NSUN4Q96CB9 384 aaKnown RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 CCDC51Q96ER9 411 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 NUP88Q99567 741 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 PARD6BQ9BYG5 372 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 CACNA1SQ13698 1873 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 POLR3GO15318 223 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 ORC4O43929 436 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 GYPCP04921 128 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 KIF5BP33176 963 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 FXR1P51114 621 aaKnown RBP eCLIP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 FAM193AP78312 1265 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 SPAG1Q07617 926 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 KRT31Q15323 416 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 E2F4Q16254 413 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 PFKFB3Q16875 520 aaPredicted RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 NELFBQ8WX92 580 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 CELF1Q92879 486 aaKnown RBP12.11□□□□□ -0.47
PSPC1-207ENST00000635251 ARFGAP3Q9NP61 516 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
PSPC1-207ENST00000635251 TAB2Q9NYJ8 693 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms