RNA–Protein interactions for RNA: ENST00000635214.1

PATJ-216, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 4,863 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-216ENST00000635214 IMPG2Q9BZV3 1241 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 Q9H521 79 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 KLHL14Q9P2G3 628 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 PARP2Q9UGN5 583 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 TNS2Q63HR2 1409 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 KRT2P35908 639 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 EIF4A1P60842 406 aaKnown RBP9.74□□□□□ -0.85
PATJ-216ENST00000635214 IFIT1BQ5T764 474 aaKnown RBP9.74□□□□□ -0.85
PATJ-216ENST00000635214 CCDC170Q8IYT3 715 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 UBL4BQ8N7F7 174 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 RGS22Q8NE09 1264 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 NOC4LQ9BVI4 516 aaKnown RBP9.74□□□□□ -0.85
PATJ-216ENST00000635214 HMGB1P1B2RPK0 211 aaPredicted RBP9.74□□□□□ -0.85
PATJ-216ENST00000635214 PPP2R5EQ16537 467 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 JRKLQ9Y4A0 524 aa9.74□□□□□ -0.85
PATJ-216ENST00000635214 TMEM110-MUSTN1A8MSY1 372 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 TXNDC9O14530 226 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 GRIN3BO60391 1043 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 PLCG2P16885 1265 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 ST5P78524 1137 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 RASIP1Q5U651 963 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 LMBR1LQ6UX01 489 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 DDX27Q96GQ7 796 aaKnown RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 SAR1BQ9Y6B6 198 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 COL5A2P05997 1499 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 NMIQ13287 307 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 TRAPPC3LQ5T215 181 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 DTHD1Q6ZMT9 781 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 NLGN1Q8N2Q7 840 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 RABGGTAQ92696 567 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 KRT9P35527 623 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 PEX19P40855 299 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 MAGEA1P43355 309 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 PDE1CQ14123 709 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 FCHSD1Q86WN1 690 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 LEO1Q8WVC0 666 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 RAB17Q9H0T7 212 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 RABEP2Q9H5N1 569 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 C6orf50Q9HD87 102 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 PSDA5PKW4 1024 aaPredicted RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 CUTAO60888 179 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.85
PATJ-216ENST00000635214 CCT6AP40227 531 aaKnown RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 PLCD1P51178 756 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 LGSNQ5TDP6 509 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 SYCE1Q8N0S2 351 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 ZBTB9Q96C00 473 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 MRFAP1L1Q96HT8 127 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 TACO1Q9BSH4 297 aaKnown RBP9.73□□□□□ -0.85
PATJ-216ENST00000635214 SNRKQ9NRH2 765 aa9.73□□□□□ -0.85
PATJ-216ENST00000635214 PFDN1O60925 122 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 ARL1P40616 181 aaPredicted RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 ANO1Q5XXA6 986 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 SSH3Q8TE77 659 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 PPANQ9NQ55 473 aaKnown RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 TMEM63CQ9P1W3 806 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 KCNH3Q9ULD8 1083 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 I3L4J1 428 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 MCM7P33993 719 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 AFAP1L2Q8N4X5 818 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 EXOC4Q96A65 974 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 WWC3Q9ULE0 1092 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 FAF1Q9UNN5 650 aaPredicted RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 SYNRGQ9UMZ2 1314 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 EYA2O00167 538 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 RAPGEF1Q13905 1077 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 DENND2CQ68D51 928 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 VPS16Q9H269 839 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 DDX41Q9UJV9 622 aaKnown RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 ODF2LQ9ULJ1 636 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 SPOPO43791 374 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 MGEA5O60502 916 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 SMIM24O75264 130 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 DBN1Q16643 649 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 NFATC2IPQ8NCF5 419 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 VAT1LQ9HCJ6 419 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
PATJ-216ENST00000635214 FAM208AQ9UK61 1670 aaKnown RBP9.72□□□□□ -0.85
PATJ-216ENST00000635214 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.71□□□□□ -0.85
PATJ-216ENST00000635214 RGS12O14924 1447 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 RGS16O15492 202 aaPredicted RBP9.71□□□□□ -0.85
PATJ-216ENST00000635214 BRD1O95696 1058 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 GJC1P36383 396 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 NT5C2P49902 561 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 WDR78Q5VTH9 848 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 CCDC84Q86UT8 332 aaPredicted RBP9.71□□□□□ -0.85
PATJ-216ENST00000635214 NFE2L3Q9Y4A8 694 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 EVI5O60447 810 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 STX2P32856 288 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 APOBRQ0VD83 1088 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 ZKSCAN8Q15776 578 aaPredicted RBP9.71□□□□□ -0.85
PATJ-216ENST00000635214 C16orf71Q8IYS4 520 aaPredicted RBP9.71□□□□□ -0.85
PATJ-216ENST00000635214 TRIM58Q8NG06 486 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 MAIP1Q8WWC4 291 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 NLRP3Q96P20 1036 aa9.71□□□□□ -0.85
PATJ-216ENST00000635214 NAP1L4Q99733 375 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms