RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 COG2Q14746 738 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 TTC22Q5TAA0 569 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 ZNF589Q86UQ0 364 aaPredicted RBP18.65■□□□□ 0.58
LINC00339-207ENST00000634712 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 CWC22Q9HCG8 908 aaKnown RBP18.65■□□□□ 0.58
LINC00339-207ENST00000634712 RBPJLQ9UBG7 517 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 BIN2Q9UBW5 565 aaPredicted RBP18.65■□□□□ 0.58
LINC00339-207ENST00000634712 RABGAP1Q9Y3P9 1069 aa18.65■□□□□ 0.58
LINC00339-207ENST00000634712 ZSWIM8A7E2V4 1837 aa18.64■□□□□ 0.58
LINC00339-207ENST00000634712 FGAP02671 866 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 ERVK-9P63128 1117 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 ERVK-24P63145 666 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 SH3TC2Q8TF17 1288 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 TMEM106CQ9BVX2 250 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 NYAP2Q9P242 653 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 GABRQQ9UN88 632 aa18.64■□□□□ 0.57
LINC00339-207ENST00000634712 MGAMO43451 1857 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 WDR46O15213 610 aaKnown RBP18.63■□□□□ 0.57
LINC00339-207ENST00000634712 FOXP2O15409 715 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 GRK4P32298 578 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 FLT3LGP49771 235 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 CCNA1P78396 465 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 TFAP4Q01664 338 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.63■□□□□ 0.57
LINC00339-207ENST00000634712 TXNRD2Q9NNW7 524 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 TOMM22Q9NS69 142 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 CLIP2Q9UDT6 1046 aa18.63■□□□□ 0.57
LINC00339-207ENST00000634712 TSPY2A6NKD2 308 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 PEX10O60683 326 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 FLOT1O75955 427 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 MAPK4P31152 587 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 Q3C1V9 767 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 FAM47AQ5JRC9 791 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 KIAA1755Q5JYT7 1200 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 SAMD1Q6SPF0 538 aaPredicted RBP18.62■□□□□ 0.57
LINC00339-207ENST00000634712 NEDD1Q8NHV4 660 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 ZNF333Q96JL9 665 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 ANAPC4Q9UJX5 808 aa18.62■□□□□ 0.57
LINC00339-207ENST00000634712 SPDYE16A6NNV3 312 aaPredicted RBP18.61■□□□□ 0.57
LINC00339-207ENST00000634712 ADCY3O60266 1144 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 RANBP6O60518 1105 aaKnown RBP18.61■□□□□ 0.57
LINC00339-207ENST00000634712 TTLL1O95922 423 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 MYCP01106 439 aaPredicted RBP18.61■□□□□ 0.57
LINC00339-207ENST00000634712 NEFLP07196 543 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 RGS19P49795 217 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 PPP4R3BQ5MIZ7 849 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 LBX2Q6XYB7 198 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 SLAIN1Q8ND83 568 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 MTMR4Q9NYA4 1195 aa18.61■□□□□ 0.57
LINC00339-207ENST00000634712 GSPT1P15170 499 aaKnown RBP18.6■□□□□ 0.57
LINC00339-207ENST00000634712 UBXN2AP68543 259 aa18.6■□□□□ 0.57
LINC00339-207ENST00000634712 MLLT1Q03111 559 aaPredicted RBP18.6■□□□□ 0.57
LINC00339-207ENST00000634712 IRF5Q13568 498 aa18.6■□□□□ 0.57
LINC00339-207ENST00000634712 WDR78Q5VTH9 848 aa18.6■□□□□ 0.57
LINC00339-207ENST00000634712 CENPQQ7L2Z9 268 aaPredicted RBP18.6■□□□□ 0.57
LINC00339-207ENST00000634712 CEP95Q96GE4 821 aa18.6■□□□□ 0.57
LINC00339-207ENST00000634712 ZMYM6O95789 1325 aa18.6■□□□□ 0.57
LINC00339-207ENST00000634712 IGKV6D-41A0A0C4DH26 115 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 F5H6K3 240 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 DSG3P32926 999 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 HAND2P61296 217 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 KLRC3Q07444 240 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 RRP12Q5JTH9 1297 aaKnown RBP18.59■□□□□ 0.57
LINC00339-207ENST00000634712 RUFY2Q8WXA3 655 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 NUDT12Q9BQG2 462 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 INCENPQ9NQS7 918 aa18.59■□□□□ 0.57
LINC00339-207ENST00000634712 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.59■□□□□ 0.57
LINC00339-207ENST00000634712 HTTP42858 3142 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 ZNF213O14771 459 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 CNMDO75829 334 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 FAM83BQ5T0W9 1011 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 MFSD6Q6ZSS7 791 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 PLEKHH3Q7Z736 793 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 MB21D1Q8N884 522 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 PXYLP1Q8TE99 480 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 MKL1Q969V6 931 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 PORCNQ9H237 461 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 BTBD7Q9P203 1132 aa18.58■□□□□ 0.57
LINC00339-207ENST00000634712 ORC4O43929 436 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 PLS1Q14651 629 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 POTEEQ6S8J3 1075 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 GPR142Q7Z601 462 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 SOCS4Q8WXH5 440 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 CCDC136Q96JN2 1154 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 RNF41Q9H4P4 317 aaPredicted RBP18.57■□□□□ 0.56
LINC00339-207ENST00000634712 CTNNA3Q9UI47 895 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 GJD2Q9UKL4 321 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 SYNPO2Q9UMS6 1093 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 STX8Q9UNK0 236 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 IVNS1ABPQ9Y6Y0 642 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 DOCK3Q8IZD9 2030 aa18.57■□□□□ 0.56
LINC00339-207ENST00000634712 NDUFB10O96000 172 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 PCP11498 1178 aaKnown RBP18.56■□□□□ 0.56
LINC00339-207ENST00000634712 ELNP15502 786 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 CYP2B6P20813 491 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 AKNAD1Q5T1N1 836 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 LRRC47Q8N1G4 583 aaKnown RBP18.56■□□□□ 0.56
LINC00339-207ENST00000634712 ATG4CQ96DT6 458 aa18.56■□□□□ 0.56
LINC00339-207ENST00000634712 DSCC1Q9BVC3 393 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms