RNA–Protein interactions for RNA: ENST00000633552.1

GPCPD1-207, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-207ENST00000633552 ITIH2P19823 946 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 SLC7A5Q01650 507 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 DDR2Q16832 855 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 RSPO4Q2I0M5 234 aaPredicted RBP6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 SFRP5Q5T4F7 317 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 KIAA1211LQ6NV74 962 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 OGFOD3Q6PK18 319 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 TMEM192Q8IY95 271 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 CELF2-AS1Q8N7Q2 184 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 DNAJB8Q8NHS0 232 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 SHKBP1Q8TBC3 707 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 SRPK1Q96SB4 655 aaKnown RBP6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 METTL22Q9BUU2 404 aaPredicted RBP6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 SUCOQ9UBS9 1254 aaKnown RBP6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 LTBP3Q9NS15 1303 aa6.68□□□□□ -1.34
GPCPD1-207ENST00000633552 F13BP05160 661 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 H2AFB1P0C5Y9 115 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 H2AFB2P0C5Z0 115 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 PMS1P54277 932 aaKnown RBP6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 RBL2Q08999 1139 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 CCDC144BQ3MJ40 725 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 NKAPLQ5M9Q1 402 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 FAM178BQ8IXR5 827 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 SHISA5Q8N114 240 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 PPP1R13LQ8WUF5 828 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 PPP1R14AQ96A00 147 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 ASPNQ9BXN1 380 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 SIRPGQ9P1W8 387 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 FBXL21Q9UKT6 434 aa6.67□□□□□ -1.34
GPCPD1-207ENST00000633552 FAM155AB1AL88 458 aaPredicted RBP6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 DYRK3O43781 588 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 GJB6O95452 261 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 EOMESO95936 686 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 NCAPHQ15003 741 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 FAM181AQ8N9Y4 354 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 RNF141Q8WVD5 230 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 GATA6Q92908 595 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 MRFAP1L1Q96HT8 127 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 KRTAP9-9Q9BYP9 154 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 KRTAP9-4Q9BYQ2 154 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 ZNF214Q9UL59 606 aaPredicted RBP6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 LEMD3Q9Y2U8 911 aa6.66□□□□□ -1.34
GPCPD1-207ENST00000633552 C9IYK1 514 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 NFE2L2Q16236 605 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 HEATR6Q6AI08 1181 aaKnown RBP6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 ADAT2Q7Z6V5 191 aaKnown RBP6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 MFSD4AQ8N468 514 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 MICAL1Q8TDZ2 1067 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 SMARCC1Q92922 1105 aaPredicted RBP6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 ASCC2Q9H1I8 757 aaPredicted RBP6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 KCNH3Q9ULD8 1083 aa6.65□□□□□ -1.34
GPCPD1-207ENST00000633552 CYP26A1O43174 497 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 NAT2P11245 290 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 IFRD2Q12894 506 aaPredicted RBP6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 NBPF12Q5TAG4 269 aaPredicted RBP6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 CDKAL1Q5VV42 579 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 DCAF15Q66K64 600 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 EEPD1Q7L9B9 569 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 COX4I2Q96KJ9 171 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 DEPDC7Q96QD5 511 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 GBP3Q9H0R5 595 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 SUGT1Q9Y2Z0 365 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
GPCPD1-207ENST00000633552 LRRN2O75325 713 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 KIR3DL1P43629 444 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 SERINC3Q13530 473 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 TCEAL1Q15170 157 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 CLEC16AQ2KHT3 1053 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 NOL9Q5SY16 702 aaKnown RBP6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 AXDND1Q5T1B0 1012 aaPredicted RBP6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 KLHL6Q8WZ60 621 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 HEXIM2Q96MH2 286 aaKnown RBP6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 HAUS7Q99871 368 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 DSCC1Q9BVC3 393 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 SNTG2Q9NY99 539 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 LRP2BPQ9P2M1 347 aa6.63□□□□□ -1.35
GPCPD1-207ENST00000633552 PRR33A8MZF0 331 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 MEIS1O00470 390 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 AUHQ13825 339 aaKnown RBP6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 SV2CQ496J9 727 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 MTERF2Q49AM1 385 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 C7orf61Q8IZ16 206 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 ADCY4Q8NFM4 1077 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 FGD4Q96M96 766 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 PIM2Q9P1W9 311 aa6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 CDK11AQ9UQ88 783 aaPredicted RBP6.62□□□□□ -1.35
GPCPD1-207ENST00000633552 CNTNAP4Q9C0A0 1308 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 AGRPO00253 132 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 IGF2BP3O00425 579 aaKnown RBP eCLIP6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 PDPK1O15530 556 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 SUSD5O60279 629 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 EPHX1P07099 455 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 ITGA4P13612 1032 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 CPSF6Q16630 551 aaKnown RBP eCLIP6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 NBPF9Q3BBW0 867 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 PRSS36Q5K4E3 855 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 MRM1Q6IN84 353 aaKnown RBP6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 DTWD2Q8NBA8 298 aa6.61□□□□□ -1.35
GPCPD1-207ENST00000633552 FBXL18Q96ME1 805 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms