RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 CCDC173Q0VFZ6 552 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 PICALMQ13492 652 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 PHF20Q9BVI0 1012 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 BRMS1Q9HCU9 246 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 NMRK2Q9NPI5 230 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
LIMS4-204ENST00000632897 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
LIMS4-204ENST00000632897 PSME4Q14997 1843 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 BTBD18B2RXH4 712 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 TOP1P11387 765 aaKnown RBP16.41■□□□□ 0.22
LIMS4-204ENST00000632897 FSTL1Q12841 308 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 UVSSAQ2YD98 709 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 FAM177A1Q8N128 213 aaPredicted RBP16.41■□□□□ 0.22
LIMS4-204ENST00000632897 FSIP1Q8NA03 581 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 EHD4Q9H223 541 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 KCNQ5Q9NR82 932 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 SERPINB13Q9UIV8 391 aa16.41■□□□□ 0.22
LIMS4-204ENST00000632897 SCG2P13521 617 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 KRT2P35908 639 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 PTPAQ15257 358 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 PFKFB3Q16875 520 aaPredicted RBP16.4■□□□□ 0.22
LIMS4-204ENST00000632897 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 KIAA0825Q8IV33 1275 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 IDI2Q9BXS1 227 aa16.4■□□□□ 0.22
LIMS4-204ENST00000632897 DHX36Q9H2U1 1008 aaKnown RBP16.4■□□□□ 0.22
LIMS4-204ENST00000632897 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.4■□□□□ 0.22
LIMS4-204ENST00000632897 MORC2Q9Y6X9 1032 aaPredicted RBP16.4■□□□□ 0.22
LIMS4-204ENST00000632897 KINO60870 393 aaKnown RBP16.39■□□□□ 0.21
LIMS4-204ENST00000632897 RASSF7Q02833 373 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 ENGASEQ8NFI3 743 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 PPP1R9BQ96SB3 815 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 GOLPH3LQ9H4A5 285 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 SH3GLB2Q9NR46 395 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 VPS54Q9P1Q0 977 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 MAD2L2Q9UI95 211 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 STX8Q9UNK0 236 aa16.39■□□□□ 0.21
LIMS4-204ENST00000632897 DICER1Q9UPY3 1922 aaKnown RBP16.39■□□□□ 0.21
LIMS4-204ENST00000632897 IGKV6D-41A0A0C4DH26 115 aa16.38■□□□□ 0.21
LIMS4-204ENST00000632897 PALM3A6NDB9 673 aaPredicted RBP16.38■□□□□ 0.21
LIMS4-204ENST00000632897 CMA1P23946 247 aa16.38■□□□□ 0.21
LIMS4-204ENST00000632897 SMARCA1P28370 1054 aa16.38■□□□□ 0.21
LIMS4-204ENST00000632897 SNW1Q13573 536 aaKnown RBP16.38■□□□□ 0.21
LIMS4-204ENST00000632897 AXDND1Q5T1B0 1012 aaPredicted RBP16.38■□□□□ 0.21
LIMS4-204ENST00000632897 CEP131Q9UPN4 1083 aa16.38■□□□□ 0.21
LIMS4-204ENST00000632897 FER1L6Q2WGJ9 1857 aa16.38■□□□□ 0.21
LIMS4-204ENST00000632897 MYH8P13535 1937 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 YDJCA8MPS7 323 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 CALML3P27482 149 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 CAMK4Q16566 473 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 DPY19L2Q6NUT2 758 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 FMR1NBQ8N0W7 255 aaPredicted RBP16.37■□□□□ 0.21
LIMS4-204ENST00000632897 SHISA4Q96DD7 197 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 CEP95Q96GE4 821 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 CCDC17Q96LX7 622 aa16.37■□□□□ 0.21
LIMS4-204ENST00000632897 COL2A1P02458 1487 aaPredicted RBP16.37■□□□□ 0.21
LIMS4-204ENST00000632897 FAM237AA0A1B0GTK4 181 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 GLTPD2A6NH11 291 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 CUTAO60888 179 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 BMP15O95972 392 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 RBM5P52756 815 aaKnown RBP eCLIP16.36■□□□□ 0.21
LIMS4-204ENST00000632897 RNF214Q8ND24 703 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 SMC1BQ8NDV3 1235 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 SPZ1Q9BXG8 430 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 MTMR4Q9NYA4 1195 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
LIMS4-204ENST00000632897 WDR90Q96KV7 1748 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
LIMS4-204ENST00000632897 CAVIN2O95810 425 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 PARP1P09874 1014 aaKnown RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 SHMT1P34896 483 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 TYRO3Q06418 890 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 NFIAQ12857 509 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 NR5A1Q13285 461 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 RSBN1LQ6PCB5 846 aaPredicted RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 TNFRSF25Q93038 417 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 RRAGCQ9HB90 399 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 GREB1LQ9C091 1923 aaPredicted RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 hCG_1642624A0A1W2PR95 340 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 ENTPD3O75355 529 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 AKR1B1P15121 316 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 VEGFAP15692 232 aaPredicted RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 NLRP5P59047 1200 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 NPY5RQ15761 445 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 SASS6Q6UVJ0 657 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 STAG2Q8N3U4 1231 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 KRI1Q8N9T8 703 aaKnown RBP16.35■□□□□ 0.21
LIMS4-204ENST00000632897 PI4KBQ9UBF8 816 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 FAM198AQ9UFP1 575 aa16.35■□□□□ 0.21
LIMS4-204ENST00000632897 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 NFKBIEO00221 500 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 TTLL1O95922 423 aa16.34■□□□□ 0.21
LIMS4-204ENST00000632897 VIL1P09327 827 aaKnown RBP16.34■□□□□ 0.21
LIMS4-204ENST00000632897 MARCKSP29966 332 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms