RNA–Protein interactions for RNA: ENST00000630016.1

CHD2-219, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-219ENST00000630016 SP110Q9HB58 689 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 PCDHA11Q9Y5I1 949 aa6.25□□□□□ -1.41
CHD2-219ENST00000630016 TNNI2P48788 182 aa6.24□□□□□ -1.41
CHD2-219ENST00000630016 DLG4P78352 724 aa6.24□□□□□ -1.41
CHD2-219ENST00000630016 SPPL2CQ8IUH8 684 aa6.24□□□□□ -1.41
CHD2-219ENST00000630016 ANKS4BQ8N8V4 417 aa6.24□□□□□ -1.41
CHD2-219ENST00000630016 GPR160Q9UJ42 338 aa6.24□□□□□ -1.41
CHD2-219ENST00000630016 YBX2Q9Y2T7 364 aaKnown RBP6.24□□□□□ -1.41
CHD2-219ENST00000630016 BICRAQ9NZM4 1560 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 CECR2Q9BXF3 1484 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 PDE6BP35913 854 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 BUD31P41223 144 aaPredicted RBP6.23□□□□□ -1.41
CHD2-219ENST00000630016 SNX17Q15036 470 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 TIGD5Q53EQ6 642 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 MEI1Q5TIA1 1274 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 TMEM132EQ6IEE7 984 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 DUSP9Q99956 384 aaKnown RBP6.23□□□□□ -1.41
CHD2-219ENST00000630016 TLR6Q9Y2C9 796 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 CORINQ9Y5Q5 1042 aa6.23□□□□□ -1.41
CHD2-219ENST00000630016 RFXAPO00287 272 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 HOXA5P20719 270 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 EAPPQ56P03 285 aaPredicted RBP6.22□□□□□ -1.41
CHD2-219ENST00000630016 TMEM201Q5SNT2 666 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 LCE5AQ5TCM9 118 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 CCDC84Q86UT8 332 aaPredicted RBP6.22□□□□□ -1.41
CHD2-219ENST00000630016 SLFN12Q8IYM2 578 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 BAHD1Q8TBE0 780 aaPredicted RBP6.22□□□□□ -1.41
CHD2-219ENST00000630016 NOC4LQ9BVI4 516 aaKnown RBP6.22□□□□□ -1.41
CHD2-219ENST00000630016 ASPNQ9BXN1 380 aa6.22□□□□□ -1.41
CHD2-219ENST00000630016 CNOT6Q9ULM6 557 aaKnown RBP6.22□□□□□ -1.41
CHD2-219ENST00000630016 TEX51A0A1B0GUA7 166 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 MYOCOSA0A1B0GUC4 107 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 ST13P50502 369 aaKnown RBP6.21□□□□□ -1.42
CHD2-219ENST00000630016 CHMP4BP1P59074 171 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 CLEC16AQ2KHT3 1053 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 PHC3Q8NDX5 983 aa6.21□□□□□ -1.42
CHD2-219ENST00000630016 RBM47A0AV96 593 aaKnown RBP6.2□□□□□ -1.42
CHD2-219ENST00000630016 PATL2C9JE40 543 aaKnown RBP6.2□□□□□ -1.42
CHD2-219ENST00000630016 LRRN2O75325 713 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 TEKQ02763 1124 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 TAF1CQ15572 869 aaPredicted RBP6.2□□□□□ -1.42
CHD2-219ENST00000630016 ZNF385BQ569K4 471 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 TCERG1LQ5VWI1 586 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 KREMEN1Q96MU8 473 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 ASCC2Q9H1I8 757 aaPredicted RBP6.2□□□□□ -1.42
CHD2-219ENST00000630016 ZCCHC4Q9H5U6 513 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 ZNF552Q9H707 407 aaPredicted RBP6.2□□□□□ -1.42
CHD2-219ENST00000630016 PARD6AQ9NPB6 346 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
CHD2-219ENST00000630016 OR14I1A6ND48 311 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 CILPO75339 1184 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 BMP7P18075 431 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 BNC2Q6ZN30 1099 aaPredicted RBP6.19□□□□□ -1.42
CHD2-219ENST00000630016 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 CCDC74BQ96LY2 380 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 RNF19AQ9NV58 838 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 REV1Q9UBZ9 1251 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 UNC13AQ9UPW8 1703 aa6.19□□□□□ -1.42
CHD2-219ENST00000630016 LMNB2Q03252 620 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 PSMD2Q13200 908 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 PHACTR4Q8IZ21 702 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 GATAD2BQ8WXI9 593 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 RELTQ969Z4 430 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 KCTD3Q9Y597 815 aa6.18□□□□□ -1.42
CHD2-219ENST00000630016 DCAF1Q9Y4B6 1507 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 SHISA3A0PJX4 238 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 PSPNO60542 156 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 CAMK2GQ13555 558 aaPredicted RBP6.17□□□□□ -1.42
CHD2-219ENST00000630016 ADGRF1Q5T601 910 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 RNF111Q6ZNA4 994 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 C20orf173Q96LM9 149 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 GCM1Q9NP62 436 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 PARP2Q9UGN5 583 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 PRR36Q9H6K5 1346 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 CC2D2AQ9P2K1 1620 aa6.17□□□□□ -1.42
CHD2-219ENST00000630016 FAM221AA4D161 298 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 F13A1P00488 732 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 RPL10P27635 214 aaKnown RBP6.16□□□□□ -1.42
CHD2-219ENST00000630016 GBP1P32455 592 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 ENOX1Q8TC92 643 aaKnown RBP6.16□□□□□ -1.42
CHD2-219ENST00000630016 LINC01599Q8WXQ3 324 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 SGPP1Q9BX95 441 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 EBF1Q9UH73 591 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 ZMYM5Q9UJ78 669 aa6.16□□□□□ -1.42
CHD2-219ENST00000630016 ANKRD33BA6NCL7 494 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 CHURC1-FNTBB4DL54 471 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 HRKO00198 91 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 USP2O75604 605 aaPredicted RBP6.15□□□□□ -1.42
CHD2-219ENST00000630016 HTR3BO95264 441 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 PF4P02776 101 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 GALK1P51570 392 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 RNF4P78317 190 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 DAB2P98082 770 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 XPCQ01831 940 aaPredicted RBP6.15□□□□□ -1.42
CHD2-219ENST00000630016 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
CHD2-219ENST00000630016 MLECQ14165 292 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 WAPLQ7Z5K2 1190 aa6.15□□□□□ -1.42
CHD2-219ENST00000630016 SIRT2Q8IXJ6 389 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms