RNA–Protein interactions for RNA: ENST00000629387.2

TCF4-268, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-268ENST00000629387 SPDYE16A6NNV3 312 aaPredicted RBP6.67□□□□□ -1.34
TCF4-268ENST00000629387 TEX28O15482 410 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 KRT14P02533 472 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 DNAJB2P25686 324 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 LMAN1P49257 510 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 CPXCR1Q8N123 301 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 ANKK1Q8NFD2 765 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 LPIN2Q92539 896 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 GTF3C6Q969F1 213 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 C8orf48Q96LL4 319 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 GLT8D2Q9H1C3 349 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 SATB2Q9UPW6 733 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 CCDC144AA2RUR9 1427 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 NCKAP5LQ9HCH0 1330 aa6.67□□□□□ -1.34
TCF4-268ENST00000629387 CDK13Q14004 1512 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 ACSL4O60488 711 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 TADA3O75528 432 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 IFIT2P09913 472 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 RHOXF2BP0C7M4 288 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 ATF7P17544 494 aaPredicted RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 CHKAP35790 457 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 SUZ12Q15022 739 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 PDXDC2PQ6P474 469 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 DGLUCYQ7Z3D6 616 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 BRSK1Q8TDC3 778 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 SMAD5Q99717 465 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 RHOXF2Q9BQY4 288 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 NUDCQ9Y266 331 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 ANKRD50Q9ULJ7 1429 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 MTHFD1P11586 935 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 RASSF3Q86WH2 238 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 NPAS4Q8IUM7 802 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 FBXO18Q8NFZ0 1043 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 FAM161BQ96MY7 647 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 THUMPD2Q9BTF0 503 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 GRIN2AQ12879 1464 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 TIAM1Q13009 1591 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 TROQ12816 1431 aaPredicted RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 MGEA5O60502 916 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 NMT2O60551 498 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 VAMP4O75379 141 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 NCAM1P13591 858 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 DDX5P17844 614 aaKnown RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 ATP5DP30049 168 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 EPS15P42566 896 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 SERPINB4P48594 390 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 TPD52P55327 224 aaPredicted RBP6.66□□□□□ -1.34
TCF4-268ENST00000629387 THEMIS2Q5TEJ8 643 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 LRRC31Q6UY01 552 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 CCDC144CPQ8IYA2 1237 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 NBPF15Q8N660 670 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 ACMSDQ8TDX5 336 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 CCT7Q99832 543 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.66□□□□□ -1.34
TCF4-268ENST00000629387 PLB1Q6P1J6 1458 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 CLASP1Q7Z460 1538 aa6.66□□□□□ -1.34
TCF4-268ENST00000629387 TROVE2P10155 538 aaKnown RBP eCLIP6.65□□□□□ -1.34
TCF4-268ENST00000629387 HDGFP51858 240 aaKnown RBP6.65□□□□□ -1.34
TCF4-268ENST00000629387 MTX1Q13505 466 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 SHROOM1Q2M3G4 852 aaPredicted RBP6.65□□□□□ -1.34
TCF4-268ENST00000629387 MAJINQ3KP22 176 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 SLFNL1Q499Z3 407 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 CWC27Q6UX04 472 aaKnown RBP6.65□□□□□ -1.34
TCF4-268ENST00000629387 NCCRP1Q6ZVX7 275 aaPredicted RBP6.65□□□□□ -1.34
TCF4-268ENST00000629387 GOT1L1Q8NHS2 421 aaPredicted RBP6.65□□□□□ -1.34
TCF4-268ENST00000629387 SGCDQ92629 289 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 SELENOOQ9BVL4 669 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 QPCTLQ9NXS2 382 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 IQGAP2Q13576 1575 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 UACAQ9BZF9 1416 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 PFDN1O60925 122 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 ERLIN2O94905 339 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 CASP2P42575 452 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 STT3AP46977 705 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 CETN1Q12798 172 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 EMC10Q5UCC4 262 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 PPP1R21Q6ZMI0 780 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 RTL10Q7L3V2 364 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 PGBD4Q96DM1 585 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 UBN1Q9NPG3 1134 aa6.65□□□□□ -1.34
TCF4-268ENST00000629387 MCM3P25205 808 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 NFIAQ12857 509 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 CUL3Q13618 768 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 VWA3BQ502W6 1294 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 CDCA2Q69YH5 1023 aaPredicted RBP6.65□□□□□ -1.35
TCF4-268ENST00000629387 TAS1R3Q7RTX0 852 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 PPFIBP1Q86W92 1011 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 TTC39CQ8N584 583 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 BBOF1Q8ND07 529 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 SLAIN1Q8ND83 568 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 CCDC148Q8NFR7 591 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 ANKRD7Q92527 254 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 RABGGTAQ92696 567 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 LRRC45Q96CN5 670 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 ALPK1Q96QP1 1244 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 SRRTQ9BXP5 876 aaKnown RBP6.65□□□□□ -1.35
TCF4-268ENST00000629387 FAM107BQ9H098 131 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 CSRNP2Q9H175 543 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 NRDE2Q9H7Z3 1164 aa6.65□□□□□ -1.35
TCF4-268ENST00000629387 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms