RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 CMA1P23946 247 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CDK8P49336 464 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 GSTO1P78417 241 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 ARID5AQ03989 594 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 AOC3Q16853 763 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TTBK2Q6IQ55 1244 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CPXCR1Q8N123 301 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 PDGFDQ9GZP0 370 aaPredicted RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 TDRD3Q9H7E2 651 aaKnown RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 GJA3Q9Y6H8 435 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 ZBTB7AO95365 584 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 LIFRP42702 1097 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 PPARDQ03181 441 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 DTHD1Q6ZMT9 781 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 KRBA2Q6ZNG9 492 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 MNS1Q8NEH6 495 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 ZNF384Q8TF68 577 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 DRC1Q96MC2 740 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 FEZ1Q99689 392 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TMEM47Q9BQJ4 181 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 POLR3EQ9NVU0 708 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TAB2Q9NYJ8 693 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 RTL9Q8NET4 1388 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 PCNTO95613 3336 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 ADAMTS3O15072 1205 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 MYL5Q02045 173 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 NFIAQ12857 509 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TSR1Q2NL82 804 aaKnown RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 FKBP15Q5T1M5 1219 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TRIM47Q96LD4 638 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 TCP11L1Q9NUJ3 509 aa8.53□□□□□ -1.04
PKP4-217ENST00000628904 CTDP1Q9Y5B0 961 aaPredicted RBP8.53□□□□□ -1.04
PKP4-217ENST00000628904 H0YIN7 160 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 HLA-DOAP06340 250 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 ANKRD20A12PQ8NF67 263 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 TBC1D16Q8TBP0 767 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 RRP36Q96EU6 259 aaKnown RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 ZNF287Q9HBT7 754 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 JCADQ9P266 1359 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 FAM208AQ9UK61 1670 aaKnown RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 DDX39AO00148 427 aaKnown RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 TPM1P09493 284 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 FILIP1LQ4L180 1135 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 CCDC174Q6PII3 467 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 BARGINQ6ZT62 677 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 LARGE2Q8N3Y3 721 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 PDLIM2Q96JY6 352 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 KANSL2Q9H9L4 492 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 ARPP21Q9UBL0 812 aaPredicted RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 ADAMTSL3P82987 1691 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 CUTAO60888 179 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 SLC1A4P43007 532 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 TOB1P50616 345 aaPredicted RBP8.52□□□□□ -1.05
PKP4-217ENST00000628904 GNG11P61952 73 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 NTRK3Q16288 839 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 PTPROQ16827 1216 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 PRAMEF18Q5VWM3 479 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 FBXO33Q7Z6M2 555 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 BLIDQ8IZY5 108 aa8.52□□□□□ -1.05
PKP4-217ENST00000628904 AKR1B1P15121 316 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 NLRP12P59046 1061 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 CHMP4BP1P59074 171 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 DDR1Q08345 913 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 COL23A1Q86Y22 540 aaPredicted RBP8.51□□□□□ -1.05
PKP4-217ENST00000628904 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 ATP8A2Q9NTI2 1148 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 GDAQ9Y2T3 454 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L15C9J2P7 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L13C9JLJ4 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L11C9JVI0 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L18D6R9N7 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L22D6RA61 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L17D6RBQ6 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L19D6RCP7 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L20D6RJB6 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L24Q0WX57 530 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 LRRC41Q15345 812 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 USP17L6PQ6QN14 398 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 METTL16Q86W50 562 aaKnown RBP8.51□□□□□ -1.05
PKP4-217ENST00000628904 NELFCDQ8IXH7 590 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 PLEKHA4Q9H4M7 779 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 MAGEC2Q9UBF1 373 aaPredicted RBP8.51□□□□□ -1.05
PKP4-217ENST00000628904 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 HOXA13P31271 388 aaPredicted RBP8.51□□□□□ -1.05
PKP4-217ENST00000628904 CYP4A11Q02928 519 aa8.51□□□□□ -1.05
PKP4-217ENST00000628904 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
PKP4-217ENST00000628904 MTIF2P46199 727 aaKnown RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 LRRC8AQ8IWT6 810 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 ZNF277Q9NRM2 450 aaPredicted RBP8.5□□□□□ -1.05
PKP4-217ENST00000628904 TMOD2Q9NZR1 351 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 TCEAL9Q9UHQ7 104 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 CFBP00751 764 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 TROAPQ12815 778 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 CUL4BQ13620 913 aa8.5□□□□□ -1.05
PKP4-217ENST00000628904 TEX35Q5T0J7 233 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms