RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 FAM83AQ86UY5 434 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 CLEC10AQ8IUN9 316 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 MYO5AQ9Y4I1 1855 aaKnown RBP14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 FLOT1O75955 427 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 KRT85P78386 507 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZKSCAN4Q969J2 545 aaPredicted RBP14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 C8orf76Q96K31 380 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 USP17L5A8MUK1 530 aa14.35□□□□□ -0.11
SYNGAP1-207ENST00000628646 TNRC6CQ9HCJ0 1690 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZNF157P51786 506 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 SBK1Q52WX2 424 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 RRP36Q96EU6 259 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 LRP5O75197 1615 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 hCG_1642624A0A1W2PR95 340 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 ZSCAN30Q86W11 494 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 LDHDQ86WU2 507 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 CMTR1Q8N1G2 835 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 CUL5Q93034 780 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 CEP95Q96GE4 821 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 GBA2Q9HCG7 927 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 GPHNQ9NQX3 736 aaPredicted RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 TMEM232C9JQI7 657 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 HMGN5P82970 282 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 FERMT3Q86UX7 667 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 AGXT2Q9BYV1 514 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 FAM198AQ9UFP1 575 aa14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 NOL7Q9UMY1 257 aaKnown RBP14.34□□□□□ -0.11
SYNGAP1-207ENST00000628646 PLCB2Q00722 1185 aa14.33□□□□□ -0.11
SYNGAP1-207ENST00000628646 CDCA5Q96FF9 252 aa14.33□□□□□ -0.11
SYNGAP1-207ENST00000628646 IDI2Q9BXS1 227 aa14.33□□□□□ -0.11
SYNGAP1-207ENST00000628646 INPP5BP32019 993 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF76P36508 570 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 CHADLQ6NUI6 762 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 KCTD1Q719H9 257 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 HOMER2Q9NSB8 354 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 ARAP2Q8WZ64 1704 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 TRAF5O00463 557 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 SLURP2P0DP57 97 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC174Q6PII3 467 aa14.33□□□□□ -0.12
SYNGAP1-207ENST00000628646 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 USP14P54578 494 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 ANKRD13AQ8IZ07 590 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 CHURC1Q8WUH1 139 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 TSPY26PQ9H489 355 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 NAPAP54920 295 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC183Q5T5S1 534 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 OTUD7BQ6GQQ9 843 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 PABPC4Q13310 644 aaKnown RBP eCLIP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZC3H15Q8WU90 426 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 V9GY48 417 aaPredicted RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 RREB1Q92766 1687 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF280AP59817 542 aaPredicted RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 C16orf86Q6ZW13 317 aa14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
SYNGAP1-207ENST00000628646 KLRF2D3W0D1 207 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 EXOSC10Q01780 885 aaKnown RBP14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 USH1GQ495M9 461 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 FKBP1CQ5VVH2 108 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 CYB5R4Q7L1T6 521 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC12Q8WUD4 166 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 PPP2R3BQ9Y5P8 575 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 GOLGA6L6A8MZA4 724 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZBED4O75132 1171 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 USP17L2Q6R6M4 530 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 SMC1BQ8NDV3 1235 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 PHKBQ93100 1093 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 CCDC34Q96HJ3 373 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 ALG1Q9BT22 464 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 ELP1O95163 1332 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 RASA1P20936 1047 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 SLC16A2P36021 539 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 HMGCS2P54868 508 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 FAM173BQ6P4H8 233 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 DLK2Q6UY11 383 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 RNF214Q8ND24 703 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 NEDD1Q8NHV4 660 aa14.31□□□□□ -0.12
SYNGAP1-207ENST00000628646 FIBPO43427 364 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 CTDNEP1O95476 244 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 ADD1P35611 737 aaKnown RBP14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 SMARCC2Q8TAQ2 1214 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF384Q8TF68 577 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 GMLQ99445 158 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 CHD4Q14839 1912 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 JAK2O60674 1132 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 TRAF1Q13077 416 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 ORC4O43929 436 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 ZNF500O60304 480 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 BMP3P12645 472 aa14.3□□□□□ -0.12
SYNGAP1-207ENST00000628646 MOB2Q70IA6 237 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms