RNA–Protein interactions for RNA: ENST00000628293.1

CCDC163-204, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 1,076 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-204ENST00000628293 MKNK2Q9HBH9 465 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 IL17RBQ9NRM6 502 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 MTMR4Q9NYA4 1195 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 TMOD4Q9NZQ9 345 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 NYAP2Q9P242 653 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 TAF6LQ9Y6J9 622 aa9.35□□□□□ -0.91
CCDC163-204ENST00000628293 ZNFX1Q9P2E3 1918 aaKnown RBP9.35□□□□□ -0.91
CCDC163-204ENST00000628293 RBBP6Q7Z6E9 1792 aaKnown RBP9.35□□□□□ -0.91
CCDC163-204ENST00000628293 SMCHD1A6NHR9 2005 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 ZNF236Q9UL36 1845 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 NMT2O60551 498 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 PEX10O60683 326 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 SLC3A2P08195 630 aaKnown RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 USP14P54578 494 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 TFAP4Q01664 338 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 AKNAD1Q5T1N1 836 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 CTU1Q7Z7A3 348 aaKnown RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 ZNF444Q8N0Y2 327 aaPredicted RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 RUFY2Q8WXA3 655 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 P2RX7Q99572 595 aaKnown RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 ESYT1Q9BSJ8 1104 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 LSG1Q9H089 658 aaKnown RBP9.34□□□□□ -0.91
CCDC163-204ENST00000628293 ARHGEF10LQ9HCE6 1279 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 TXNRD2Q9NNW7 524 aa9.34□□□□□ -0.91
CCDC163-204ENST00000628293 CENPFP49454 3210 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 SPDYE16A6NNV3 312 aaPredicted RBP9.33□□□□□ -0.92
CCDC163-204ENST00000628293 CNMDO75829 334 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 TSPY3P0CV98 308 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 TSPY8P0CW00 308 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 HERVK_113P62684 666 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 PABPC4Q13310 644 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC163-204ENST00000628293 FAM110CQ1W6H9 321 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 RASGRP2Q7LDG7 609 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 OTOP1Q7RTM1 612 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 SPICE1Q8N0Z3 855 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 LPAR1Q92633 364 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 MKL1Q969V6 931 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 ERO1AQ96HE7 468 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 MCOLN1Q9GZU1 580 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 RPAP3Q9H6T3 665 aaPredicted RBP9.33□□□□□ -0.92
CCDC163-204ENST00000628293 ZNF287Q9HBT7 754 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 MORF4L1Q9UBU8 362 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 PNMA3Q9UL41 463 aa9.33□□□□□ -0.92
CCDC163-204ENST00000628293 PLXNA1Q9UIW2 1896 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 TSPY2A6NKD2 308 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L15C9J2P7 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L13C9JLJ4 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L11C9JVI0 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L18D6R9N7 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L22D6RA61 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L17D6RBQ6 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L19D6RCP7 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L20D6RJB6 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 ZNF213O14771 459 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 WDR46O15213 610 aaKnown RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 CDC45O75419 566 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 CYP21A2P08686 494 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 PCP11498 1178 aaKnown RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 OSBPP22059 807 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 GCLCP48506 637 aaPredicted RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 IRX3P78415 501 aaPredicted RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 ATP2B2Q01814 1243 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 USP17L24Q0WX57 530 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 RCSD1Q6JBY9 416 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 LBX2Q6XYB7 198 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 STOX1Q6ZVD7 989 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 LRRC47Q8N1G4 583 aaKnown RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 SMCR8Q8TEV9 937 aaPredicted RBP9.32□□□□□ -0.92
CCDC163-204ENST00000628293 MAP4K1Q92918 833 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 TRIM47Q96LD4 638 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 SH2D4AQ9H788 454 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 RBPJLQ9UBG7 517 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 MYH6P13533 1939 aa9.32□□□□□ -0.92
CCDC163-204ENST00000628293 LCTP09848 1927 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 F5H6K3 240 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 RANBP6O60518 1105 aaKnown RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 TTLL1O95922 423 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 NDUFB10O96000 172 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 KLRC3Q07444 240 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 COL9A3Q14050 684 aaPredicted RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 IMMTQ16891 758 aaKnown RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 RRP12Q5JTH9 1297 aaKnown RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 FAM83BQ5T0W9 1011 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 MFSD6Q6ZSS7 791 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 GMCL1P1Q8NEA9 526 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 NUP88Q99567 741 aaPredicted RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 TCP11L1Q9NUJ3 509 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 FBXO28Q9NVF7 368 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 CLIP2Q9UDT6 1046 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 CTNNA3Q9UI47 895 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 TRIM17Q9Y577 477 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 RBM8AQ9Y5S9 174 aaKnown RBP9.31□□□□□ -0.92
CCDC163-204ENST00000628293 MYPNQ86TC9 1320 aa9.31□□□□□ -0.92
CCDC163-204ENST00000628293 B4E1Z4 1266 aa9.3□□□□□ -0.92
CCDC163-204ENST00000628293 KDM4AO75164 1064 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms