RNA–Protein interactions for RNA: ENST00000628211.2

SOX2-OT-245, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 847 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-245ENST00000628211 GNRH1P01148 92 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 VCAM1P19320 739 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 TFAP4Q01664 338 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 SP3Q02447 781 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 CTDSPL2Q05D32 466 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 USP17L24Q0WX57 530 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 DGKZQ13574 1117 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 SHROOM1Q2M3G4 852 aaPredicted RBP12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 TREML2Q5T2D2 321 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 ZNF296Q8WUU4 475 aaPredicted RBP12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 KRT23Q9C075 422 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 VCPKMTQ9H867 229 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 TOMM22Q9NS69 142 aa12.65□□□□□ -0.38
SOX2-OT-245ENST00000628211 ADGRA2Q96PE1 1338 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 SMIM22K7EJ46 135 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 RANBP6O60518 1105 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 EEF2P13639 858 aaKnown RBP12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 RGS19P49795 217 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 HAND2P61296 217 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 ATP2B2Q01814 1243 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 TRDNQ13061 729 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 FAM110CQ1W6H9 321 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 MKL1Q969V6 931 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 EMILIN3Q9NT22 766 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 TCP11L1Q9NUJ3 509 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 MTMR4Q9NYA4 1195 aa12.64□□□□□ -0.39
SOX2-OT-245ENST00000628211 MYPNQ86TC9 1320 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 A0A0G2JMZ2 1700 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 ZYXQ15942 572 aaKnown RBP12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 RNF20Q5VTR2 975 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 C17orf99Q6UX52 265 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 LBX2Q6XYB7 198 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 IQCA1Q86XH1 822 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 CEP95Q96GE4 821 aa12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 ASCC2Q9H1I8 757 aaPredicted RBP12.63□□□□□ -0.39
SOX2-OT-245ENST00000628211 A0A1W2PRG0 241 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 EPB41L2O43491 1005 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 REC8O95072 547 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 CYP2C8P10632 490 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 BCRP11274 1271 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 PRMT2P55345 433 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 HERVK_113P62684 666 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 FAM47AQ5JRC9 791 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 RRP12Q5JTH9 1297 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 CATSPERGQ6ZRH7 1159 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 TBC1D10CQ8IV04 446 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 MB21D1Q8N884 522 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 GMCL1P1Q8NEA9 526 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 TTC14Q96N46 770 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 IL25Q9H293 177 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 RPAP3Q9H6T3 665 aaPredicted RBP12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 HOXC10Q9NYD6 342 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 STX8Q9UNK0 236 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 RLFQ13129 1914 aa12.62□□□□□ -0.39
SOX2-OT-245ENST00000628211 HOXD10P28358 340 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 CCNA1P78396 465 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 PTH1RQ03431 593 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 CLEC10AQ8IUN9 316 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 SIAH1Q8IUQ4 282 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 NBPF3Q9H094 633 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 R3HDMLQ9H3Y0 253 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 MORF4L1Q9UBU8 362 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 CLIP2Q9UDT6 1046 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 RBM8AQ9Y5S9 174 aaKnown RBP12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 NEDD4P46934 1319 aa12.61□□□□□ -0.39
SOX2-OT-245ENST00000628211 NOVP48745 357 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 FCGRTP55899 365 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 COG2Q14746 738 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 SART3Q15020 963 aaKnown RBP12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 NCOA7Q8NI08 942 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 EFCC1Q9HA90 598 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 CPA4Q9UI42 421 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 RABGAP1Q9Y3P9 1069 aa12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 COL11A1P12107 1806 aaPredicted RBP12.6□□□□□ -0.39
SOX2-OT-245ENST00000628211 F5H6K3 240 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 RAD21O60216 631 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 KDM4AO75164 1064 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 FLOT1O75955 427 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 CYP21A2P08686 494 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 FDX1P10109 184 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 TOP1P11387 765 aaKnown RBP12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 KLRC3Q07444 240 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 RCSD1Q6JBY9 416 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 FBXO46Q6PJ61 603 aaPredicted RBP12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 GPRC5AQ8NFJ5 357 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 CD99L2Q8TCZ2 262 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 GMCL1Q96IK5 515 aa12.59□□□□□ -0.39
SOX2-OT-245ENST00000628211 P2RX7Q99572 595 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms