RNA–Protein interactions for RNA: ENST00000627049.2

FARP1-242, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5 BASIC

Gene FARP1, Length 5,103 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-242ENST00000627049 GPR108Q9NPR9 543 aa19.7■□□□□ 0.74
FARP1-242ENST00000627049 LRRC24Q50LG9 513 aa19.7■□□□□ 0.74
FARP1-242ENST00000627049 FOXP1Q9H334 677 aaPredicted RBP19.7■□□□□ 0.74
FARP1-242ENST00000627049 A1BGP04217 495 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 SETDB1Q15047 1291 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 CACNA2D3Q8IZS8 1091 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 ANKRD65E5RJM6 399 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 ACTN4O43707 911 aaKnown RBP19.69■□□□□ 0.74
FARP1-242ENST00000627049 CALCOCO2Q13137 446 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 GRIPAP1Q4V328 841 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 KCTD16Q68DU8 428 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 CUL5Q93034 780 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 ASIC2Q16515 512 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 SLF2Q8IX21 1173 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 TRIM31Q9BZY9 425 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 SAMM50Q9Y512 469 aa19.69■□□□□ 0.74
FARP1-242ENST00000627049 NYAP1Q6ZVC0 841 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 CRACR2BQ8N4Y2 399 aaPredicted RBP19.68■□□□□ 0.74
FARP1-242ENST00000627049 CDC42BPBQ9Y5S2 1711 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 CTNNA1P35221 906 aaKnown RBP19.68■□□□□ 0.74
FARP1-242ENST00000627049 ATP11AP98196 1134 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 NCAPH2Q6IBW4 605 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 NUCKS1Q9H1E3 243 aaKnown RBP19.68■□□□□ 0.74
FARP1-242ENST00000627049 TNNI2P48788 182 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 CCDC65Q8IXS2 484 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 SMYD4Q8IYR2 804 aaPredicted RBP19.68■□□□□ 0.74
FARP1-242ENST00000627049 IFNL3Q8IZI9 196 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 LPIN2Q92539 896 aa19.68■□□□□ 0.74
FARP1-242ENST00000627049 RPN1P04843 607 aaKnown RBP19.67■□□□□ 0.74
FARP1-242ENST00000627049 RBM5P52756 815 aaKnown RBP eCLIP19.67■□□□□ 0.742e-6■■■□□ 16.5
FARP1-242ENST00000627049 KLHL30Q0D2K2 578 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 TRIM7Q9C029 511 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 MRFAP1Q9Y605 127 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 EPHB4P54760 987 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 TMEM132AQ24JP5 1023 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 SFMBT2Q5VUG0 894 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 TADA2BQ86TJ2 420 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 MED23Q9ULK4 1368 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 E9PCH4 1651 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 MMS22LQ6ZRQ5 1243 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 CROCCP2Q86T23 111 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 M0R2C6 588 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 ERCC3P19447 782 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 PTPN12Q05209 780 aaKnown RBP19.67■□□□□ 0.74
FARP1-242ENST00000627049 FUCA2Q9BTY2 467 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 NLRC4Q9NPP4 1024 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 MTUS1Q9ULD2 1270 aa19.67■□□□□ 0.74
FARP1-242ENST00000627049 COBLO75128 1261 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 TNIP1Q15025 636 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 SPATA5Q8NB90 893 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 AIFM3Q96NN9 605 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 TMEM110-MUSTN1A8MSY1 372 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 MFAP3LO75121 409 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 GSTO1P78417 241 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 TSGA10IPQ3SY00 556 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 GPHNQ9NQX3 736 aaPredicted RBP19.66■□□□□ 0.74
FARP1-242ENST00000627049 PDE6AP16499 860 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 CTNNA2P26232 953 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 PTGDRQ13258 359 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 CABP7Q86V35 215 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 GKAP1Q5VSY0 366 aaPredicted RBP19.66■□□□□ 0.74
FARP1-242ENST00000627049 MCTP2Q6DN12 878 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.66■□□□□ 0.74
FARP1-242ENST00000627049 SPHKAPQ2M3C7 1700 aa19.66■□□□□ 0.74
FARP1-242ENST00000627049 NDUFA10O95299 355 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 DCAF17Q5H9S7 520 aaPredicted RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 RESP18Q5W5W9 173 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 DAAM2Q86T65 1068 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 ARHGEF25Q86VW2 580 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 FMNL3Q8IVF7 1028 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 BANK1Q8NDB2 785 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 OSBP2Q969R2 916 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 IL25Q9H293 177 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 GJB4Q9NTQ9 266 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 CCNT1O60563 726 aaKnown RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 INTS8Q75QN2 995 aaKnown RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 DZIP3Q86Y13 1208 aaKnown RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 NKIRAS1Q9NYS0 192 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 METP08581 1390 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 FMNL1O95466 1100 aaPredicted RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 GUCY2DQ02846 1103 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 IFT88Q13099 833 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 PPP1R7Q15435 360 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.65■□□□□ 0.74
FARP1-242ENST00000627049 ZFYVE16Q7Z3T8 1539 aa19.65■□□□□ 0.74
FARP1-242ENST00000627049 RPL13P26373 211 aaKnown RBP19.64■□□□□ 0.74
FARP1-242ENST00000627049 ATP5DP30049 168 aa19.64■□□□□ 0.74
FARP1-242ENST00000627049 SLC8A1P32418 973 aa19.64■□□□□ 0.74
FARP1-242ENST00000627049 TXKP42681 527 aa19.64■□□□□ 0.74
FARP1-242ENST00000627049 WDR24Q96S15 920 aa19.64■□□□□ 0.74
FARP1-242ENST00000627049 EFCAB6Q5THR3 1501 aa19.64■□□□□ 0.74
FARP1-242ENST00000627049 CETN3O15182 167 aa19.64■□□□□ 0.73
FARP1-242ENST00000627049 PARP1P09874 1014 aaKnown RBP19.64■□□□□ 0.73
FARP1-242ENST00000627049 SRLQ86TD4 932 aa19.64■□□□□ 0.73
FARP1-242ENST00000627049 BUB1O43683 1085 aa19.64■□□□□ 0.73
FARP1-242ENST00000627049 SARNPP82979 210 aaKnown RBP19.64■□□□□ 0.73
FARP1-242ENST00000627049 AP5Z1O43299 807 aa19.63■□□□□ 0.73
FARP1-242ENST00000627049 EEF1GP26641 437 aaKnown RBP19.63■□□□□ 0.73
FARP1-242ENST00000627049 DYMQ7RTS9 669 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms