RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 FAM53CQ9NYF3 392 aa20.2■□□□□ 0.82
PCF11-207ENST00000624931 PCDHA7Q9UN72 937 aa20.2■□□□□ 0.82
PCF11-207ENST00000624931 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.2■□□□□ 0.82
PCF11-207ENST00000624931 WDHD1O75717 1129 aaPredicted RBP20.19■□□□□ 0.82
PCF11-207ENST00000624931 VIL1P09327 827 aaKnown RBP20.19■□□□□ 0.82
PCF11-207ENST00000624931 PLCD1P51178 756 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 CXCL9Q07325 125 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 STK38Q15208 465 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 LINC00301Q8NCQ3 95 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 SLC44A5Q8NCS7 719 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 ZDHHC15Q96MV8 337 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
PCF11-207ENST00000624931 CNNM2Q9H8M5 875 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 L2HGDHQ9H9P8 463 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 WDR19Q8NEZ3 1342 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 IKBKBO14920 756 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 NLRP12P59046 1061 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 NFIAQ12857 509 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 CERS3Q8IU89 383 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 TIGD1Q96MW7 591 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 GMLQ99445 158 aa20.19■□□□□ 0.82
PCF11-207ENST00000624931 ZNF215Q9UL58 517 aaPredicted RBP20.19■□□□□ 0.82
PCF11-207ENST00000624931 KLF18A0A0U1RQI7 1052 aa20.18■□□□□ 0.82
PCF11-207ENST00000624931 POLR3DP05423 398 aaPredicted RBP20.18■□□□□ 0.82
PCF11-207ENST00000624931 CFAP100Q494V2 611 aa20.18■□□□□ 0.82
PCF11-207ENST00000624931 NCOA5Q9HCD5 579 aaKnown RBP20.18■□□□□ 0.82
PCF11-207ENST00000624931 LTBP3Q9NS15 1303 aa20.18■□□□□ 0.82
PCF11-207ENST00000624931 SHTN1A0MZ66 631 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 SFPQP23246 707 aaKnown RBP eCLIP20.17■□□□□ 0.82
PCF11-207ENST00000624931 CCT2P78371 535 aaKnown RBP20.17■□□□□ 0.82
PCF11-207ENST00000624931 TMEM67Q5HYA8 995 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 IGDCC4Q8TDY8 1250 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 LY9Q9HBG7 655 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 SERPINA10Q9UK55 444 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 ROBO3Q96MS0 1386 aa20.17■□□□□ 0.82
PCF11-207ENST00000624931 IFIT3O14879 490 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 CBFA2T2O43439 604 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 RANBP6O60518 1105 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 SLC3A2P08195 630 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 FGRP09769 529 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 FAM47AQ5JRC9 791 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 ZNF771Q7L3S4 317 aaPredicted RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 C8orf76Q96K31 380 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 SRRTQ9BXP5 876 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 ANGEL1Q9UNK9 670 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 USP27XA6NNY8 438 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 GOLGA8BA8MQT2 603 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 SPTLC2O15270 562 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 CMA1P23946 247 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 HDLBPQ00341 1268 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 BMS1Q14692 1282 aaKnown RBP20.16■□□□□ 0.82
PCF11-207ENST00000624931 SYNE3Q6ZMZ3 975 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 NBPF11Q86T75 865 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 ZFPM1Q8IX07 1006 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 ESR2Q92731 530 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
PCF11-207ENST00000624931 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 PPFIA3O75145 1194 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 TPM1P09493 284 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 RXRAP19793 462 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 ARID5BQ14865 1188 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 CIAPIN1Q6FI81 312 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 TDRD3Q9H7E2 651 aaKnown RBP20.15■□□□□ 0.82
PCF11-207ENST00000624931 HPS5Q9UPZ3 1129 aa20.15■□□□□ 0.82
PCF11-207ENST00000624931 ORC4O43929 436 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 NMT2O60551 498 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 SLURP2P0DP57 97 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 KMT5BQ4FZB7 885 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 FCHSD1Q86WN1 690 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 FBXO18Q8NFZ0 1043 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 TMEM87BQ96K49 555 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 PRMT6Q96LA8 375 aaPredicted RBP20.14■□□□□ 0.81
PCF11-207ENST00000624931 MYL10Q9BUA6 226 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 MRIQ9BWK5 157 aa20.14■□□□□ 0.81
PCF11-207ENST00000624931 FDPSP14324 419 aaKnown RBP20.13■□□□□ 0.81
PCF11-207ENST00000624931 NDUFA8P51970 172 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 AMOTL1Q8IY63 956 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 JMYQ8N9B5 988 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 FTOQ9C0B1 505 aaKnown RBP eCLIP20.13■□□□□ 0.81
PCF11-207ENST00000624931 SIPA1L1O43166 1804 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 TNKSO95271 1327 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 ZNF541Q9H0D2 1346 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 CCDC66A2RUB6 948 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 SMC2O95347 1197 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 TCP10Q12799 353 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 MYSM1Q5VVJ2 828 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 NFXL1Q6ZNB6 911 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 PPP1R13BQ96KQ4 1090 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
PCF11-207ENST00000624931 FAM198AQ9UFP1 575 aa20.13■□□□□ 0.81
PCF11-207ENST00000624931 PHLPP2Q6ZVD8 1323 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 ZNF202O95125 648 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 SLFN14P0C7P3 912 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 PDE4BQ07343 736 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 TERF2Q15554 542 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 E4F1Q66K89 784 aaPredicted RBP20.12■□□□□ 0.81
PCF11-207ENST00000624931 UBAC1Q9BSL1 405 aa20.12■□□□□ 0.81
PCF11-207ENST00000624931 XPO4Q9C0E2 1151 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms