RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 NEO1Q92859 1461 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 GOLGA8KD6RF30 607 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 CABP5Q9NP86 173 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
PMS1-221ENST00000624204 TMEM67Q5HYA8 995 aa17.03■□□□□ 0.32
PMS1-221ENST00000624204 DMGDHQ9UI17 866 aaKnown RBP17.03■□□□□ 0.32
PMS1-221ENST00000624204 HSF2BPO75031 334 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 CDR1P51861 262 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 ATG9AQ7Z3C6 839 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 IP6K1Q92551 441 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 ZKSCAN4Q969J2 545 aaPredicted RBP17.02■□□□□ 0.32
PMS1-221ENST00000624204 MYH8P13535 1937 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 CHUKO15111 745 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 KRT86O43790 486 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 ELF1P32519 619 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 DPYDQ12882 1025 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 RPGRIP1Q96KN7 1286 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 PLIN2Q99541 437 aa17.02■□□□□ 0.32
PMS1-221ENST00000624204 TTC26A0AVF1 554 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 IDH1O75874 414 aaKnown RBP17.02■□□□□ 0.31
PMS1-221ENST00000624204 NAP1L1P55209 391 aaKnown RBP17.02■□□□□ 0.31
PMS1-221ENST00000624204 GUCY1A3Q02108 690 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 RABL6Q3YEC7 729 aaPredicted RBP17.02■□□□□ 0.31
PMS1-221ENST00000624204 RILPL1Q5EBL4 403 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 LRRC1Q9BTT6 524 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 LUC7L2Q9Y383 392 aaKnown RBP17.02■□□□□ 0.31
PMS1-221ENST00000624204 DUSP10Q9Y6W6 482 aa17.02■□□□□ 0.31
PMS1-221ENST00000624204 A0A087X0B3 334 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 KRT14P02533 472 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 IFT88Q13099 833 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 PAGE5Q96GU1 130 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 SLIT1O75093 1534 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 SH2B2O14492 632 aaPredicted RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 TTF1Q15361 905 aaPredicted RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 IQCEQ6IPM2 695 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 PROSER2Q86WR7 435 aaPredicted RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 OR8K1Q8NGG5 319 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 NOC3LQ8WTT2 800 aaKnown RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 PUS3Q9BZE2 481 aaKnown RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 VEZTQ9HBM0 779 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 MRC1P22897 1456 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 FNTAP49354 379 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 E2F5Q15329 346 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 TTMPQ5BVD1 217 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 CEP85LQ5SZL2 805 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 MICALCLQ6ZW33 695 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 ELOA2Q8IYF1 753 aaPredicted RBP17.01■□□□□ 0.31
PMS1-221ENST00000624204 SCLT1Q96NL6 688 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 SH3GL2Q99962 352 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 LACRTQ9GZZ8 138 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 EHD2Q9NZN4 543 aa17.01■□□□□ 0.31
PMS1-221ENST00000624204 CPDO75976 1380 aa17■□□□□ 0.31
PMS1-221ENST00000624204 KCNJ18B7U540 433 aa17■□□□□ 0.31
PMS1-221ENST00000624204 PPP1R3GB7ZBB8 358 aa17■□□□□ 0.31
PMS1-221ENST00000624204 ADORA1P30542 326 aa17■□□□□ 0.31
PMS1-221ENST00000624204 HERVK_113P62684 666 aa17■□□□□ 0.31
PMS1-221ENST00000624204 CYP27A1Q02318 531 aa17■□□□□ 0.31
PMS1-221ENST00000624204 KCNJ12Q14500 433 aa17■□□□□ 0.31
PMS1-221ENST00000624204 PTPROQ16827 1216 aa17■□□□□ 0.31
PMS1-221ENST00000624204 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
PMS1-221ENST00000624204 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
PMS1-221ENST00000624204 TSEN2Q8NCE0 465 aaKnown RBP17■□□□□ 0.31
PMS1-221ENST00000624204 AENQ8WTP8 325 aaKnown RBP17■□□□□ 0.31
PMS1-221ENST00000624204 KLC4Q9NSK0 619 aa17■□□□□ 0.31
PMS1-221ENST00000624204 SRPRBQ9Y5M8 271 aaKnown RBP17■□□□□ 0.31
PMS1-221ENST00000624204 ITIH6Q6UXX5 1313 aa17■□□□□ 0.31
PMS1-221ENST00000624204 NEBLO76041 1014 aa17■□□□□ 0.31
PMS1-221ENST00000624204 MMP1P03956 469 aa17■□□□□ 0.31
PMS1-221ENST00000624204 IL15P40933 162 aaPredicted RBP17■□□□□ 0.31
PMS1-221ENST00000624204 ZAP70P43403 619 aa17■□□□□ 0.31
PMS1-221ENST00000624204 SEC24CP53992 1094 aa17■□□□□ 0.31
PMS1-221ENST00000624204 OXER1Q8TDS5 423 aa17■□□□□ 0.31
PMS1-221ENST00000624204 MTMR7Q9Y216 660 aa17■□□□□ 0.31
PMS1-221ENST00000624204 EPB41L3Q9Y2J2 1087 aaPredicted RBP17■□□□□ 0.31
PMS1-221ENST00000624204 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 NNTQ13423 1086 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 ENOX2Q16206 610 aaKnown RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 NTRK3Q16288 839 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 ZNF790Q6PG37 636 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 AMOTL1Q8IY63 956 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 TRIM22Q8IYM9 498 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 SMCR8Q8TEV9 937 aaPredicted RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 APPBP2Q92624 585 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 VPS54Q9P1Q0 977 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 APBA1Q02410 837 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 SCARF1Q14162 830 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 ANKRD13CQ8N6S4 541 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 SPATA20Q8TB22 786 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 ZNF526Q8TF50 670 aaPredicted RBP16.99■□□□□ 0.31
PMS1-221ENST00000624204 ZBTB3Q9H5J0 574 aa16.99■□□□□ 0.31
PMS1-221ENST00000624204 CEP126Q9P2H0 1117 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms