RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 NT5C2P49902 561 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 MFAP1P55081 439 aaKnown RBP14.83□□□□□ -0.04
LINC00963-217ENST00000624009 SOX10P56693 466 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 ERVK-9P63128 1117 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 ERVK-24P63145 666 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 MB21D1Q8N884 522 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 TMEM106CQ9BVX2 250 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 NYAP2Q9P242 653 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 ANAPC4Q9UJX5 808 aa14.83□□□□□ -0.04
LINC00963-217ENST00000624009 ZNFX1Q9P2E3 1918 aaKnown RBP14.82□□□□□ -0.04
LINC00963-217ENST00000624009 MINDY4BA8MYZ0 360 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 WDR46O15213 610 aaKnown RBP14.82□□□□□ -0.04
LINC00963-217ENST00000624009 FLT3LGP49771 235 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 PPARAQ07869 468 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 COG2Q14746 738 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 SOCS4Q8WXH5 440 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.82□□□□□ -0.04
LINC00963-217ENST00000624009 RPAP3Q9H6T3 665 aaPredicted RBP14.82□□□□□ -0.04
LINC00963-217ENST00000624009 GOPCQ9HD26 462 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 TXNRD2Q9NNW7 524 aa14.82□□□□□ -0.04
LINC00963-217ENST00000624009 COL11A1P12107 1806 aaPredicted RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 ZNF236Q9UL36 1845 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 IGKV6D-41A0A0C4DH26 115 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 SPDYE16A6NNV3 312 aaPredicted RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 TRIM6-TRIM34B2RNG4 842 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 SMIM22K7EJ46 135 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 FOXP2O15409 715 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 FGRP09769 529 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 PCP11498 1178 aaKnown RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 EEF2P13639 858 aaKnown RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 UBXN2AP68543 259 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 ZYXQ15942 572 aaKnown RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 TRMT44Q8IYL2 757 aaKnown RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 ZNF444Q8N0Y2 327 aaPredicted RBP14.81□□□□□ -0.04
LINC00963-217ENST00000624009 NKX2-3Q8TAU0 364 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 MKL1Q969V6 931 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 GJD2Q9UKL4 321 aa14.81□□□□□ -0.04
LINC00963-217ENST00000624009 LAMA4Q16363 1823 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 A0A0D9SFI3 127 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 ADCY3O60266 1144 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 SDSP20132 328 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 POTEEQ6S8J3 1075 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 NEDD1Q8NHV4 660 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 GABRQQ9UN88 632 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 ADAMTS5Q9UNA0 930 aa14.8□□□□□ -0.04
LINC00963-217ENST00000624009 ORC4O43929 436 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 CNMDO75829 334 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 DSG3P32926 999 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 CCDC171Q6TFL3 1326 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 SHCBP1Q8NEM2 672 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 SH3TC2Q8TF17 1288 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 FAM227BQ96M60 508 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 NUDT12Q9BQG2 462 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 MTMR4Q9NYA4 1195 aa14.79□□□□□ -0.04
LINC00963-217ENST00000624009 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.79□□□□□ -0.042e-8■■■■■ 48.5
LINC00963-217ENST00000624009 TTLL1O95922 423 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 HMGCRP04035 888 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 GJB1P08034 283 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 TSPY3P0CV98 308 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 TSPY8P0CW00 308 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 HSPD1P10809 573 aaKnown RBP14.78□□□□□ -0.04
LINC00963-217ENST00000624009 NMIQ13287 307 aaPredicted RBP14.78□□□□□ -0.04
LINC00963-217ENST00000624009 Q3C1V9 767 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 CCDC129Q6ZRS4 1044 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 GPR142Q7Z601 462 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 PLEKHH3Q7Z736 793 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 CCAR1Q8IX12 1150 aaKnown RBP14.78□□□□□ -0.04
LINC00963-217ENST00000624009 GMCL1P1Q8NEA9 526 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 USP6NLQ92738 828 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 TANGO6Q9C0B7 1094 aa14.78□□□□□ -0.04
LINC00963-217ENST00000624009 POTEFA5A3E0 1075 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 STRNO43815 780 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 FLOT1O75955 427 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 FGAP02671 866 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 KIAA1755Q5JYT7 1200 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 MORN1Q5T089 497 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 TTC22Q5TAA0 569 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 CLEC10AQ8IUN9 316 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 PAGR1Q9BTK6 254 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 DIAPH3Q9NSV4 1193 aa14.77□□□□□ -0.05
LINC00963-217ENST00000624009 RAD50Q92878 1312 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 SLC15A5A6NIM6 579 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 HOXC6P09630 235 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 COPB2P35606 906 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 RGS2P41220 211 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 GJA8P48165 433 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 NOVP48745 357 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 ZNF589Q86UQ0 364 aaPredicted RBP14.76□□□□□ -0.05
LINC00963-217ENST00000624009 ABRAQ8N0Z2 381 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 SPICE1Q8N0Z3 855 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 APBA2Q99767 749 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 SPATC1LQ9H0A9 340 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 PORCNQ9H237 461 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 MROH8Q9H579 483 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 BTBD7Q9P203 1132 aa14.76□□□□□ -0.05
LINC00963-217ENST00000624009 BIN2Q9UBW5 565 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms